Drosophila sechellia: 6612816 Help Entry 6612816           CDS       T01064                                  Name (RefSeq) protein similar isoform X1   KO K08268   hypoxia-inducible factor 1 alpha Organism dse  Drosophila sechellia Pathway dse04137   Mitophagy - animal dse04140   Autophagy - animal dse04148   Efferocytosis Brite KEGG Orthology (KO) [BR:dse00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     6612816    04137 Mitophagy - animal     6612816    04148 Efferocytosis     6612816  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:dse03000]     6612816 Transcription factors [BR:dse03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     6612816 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS PAS_9 PAS_11 PAS_4 Motif Other DBs NCBI-GeneID:  6612816 NCBI-ProteinID:  XP_032579153 LinkDB All DBs Position 3R:28484647..28554883 Genome browser AA seq 1581 aa AA seqDB search MFNSFESCDFSGPGDNSFYGEDVIPGSTSYECDPKPQQQRQHQLSNGPAFGRMPINEPTV NFGNGSFYNGPAPGSQPFVGAILGPNMSSAGMQRYHPYHHQQPQDAFYRQRGSLLNVATP CRESRPWSYAYCYGYAPTNTQPCQFTQFVDIEDFMNNEKRKEKSRDAARCRRSKETEIFI ELSAALPLKTDDVNQLDKASVMRITIAFLKIREMLQFVPSLRDCNDAIKQDIETAEDQQE VKPKLEMGSEDWLNGAEARELLKQTMDGFLLVLSHEGDITYVSENVVEYLGITKIDTLGQ QIWEYSHQCDHAEIKDALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRLKCTLTSRGRSI NIKSASYKVIHITGHLVVNAKGERLLMAIGRPIPHPSNIEIPLGTSTFLTKHSLDMHFTY VDDKMHDLLGYLPKDLLDTSLFSCQHGADSERLMATFKSVLSKGQGETSRYRFLGKYGGY CWILSQATIVYDKLKPQSVVCVNYVISNLENKHEIYSLAQQTAASEQKEQHHQAAETKKE PEKGTDPEIILQETKETANTPIPLELQAKPLQIESEKAEKTIEETKTTATIPPVTATSTA DQIKQLPESNPYKQILQAELLIKRENHSPGPRTITAQLLSGSSSGLRPEEKRPKSVTASV LRPSPAPPLTPPPTAVLCKKTPLGVEPTLPPTTTATAAIISSSNQQLQIAQQTQLQNPQQ PAQDMSKGFCSLFADDGRGLTMLKEEPDDLSHHLASTNCIQLDEMTPFSDMLVGLMGTCL LPEDINSLDSTTCSTTASGQHYQSPSSSSTSAPSNTSSNNNSYANSPLSPLTQTPTATAS NPSHQQQQQQHHNQQQQQQQQQQHHAQHHDNSNSSSNIDPLFNYREESNDTSCSQHLHSP SITSKSPEDSSLPSLCSPNSLTQEDDFSFEAFAMRAPYIPIDDDMPLLTETDLMWCPPED LQTMVPKEIDAIQQQLQQLQQQHHQQYAGNTGYQQQQQQQPQLQQQHFSNSLCSSPASTV SSLSPSPVQQHHQQQQAAVFTSDSSELAALLCGSGNGTLSILAGSGVTVAEECNERLQQH QQQQQQSGNEFRTFQQLQQELQLQEEQQQRQQQQQQQQQQQQLLSLNIECKKEKYDVQMG GSLCHPMEDAFENDYSKDSANLDCWDLIQMQVVDTEPVSPNAASPAPCKVSAIQMLQQQQ QLPQQNIILNAVPLITIQNNKELMQQQQQQEQLQQPAIKLLNGASIAPVTTKATIRLVES KPPTTTQPRVAKVNLVPQQQQQHGNKRHLNSATGAGNPVESKRLKSGTLCLDVQSPQLLQ QLIGKDPAQHQTQAAKRAGSERWQQSAESKQQKQQQQQSNSVLKNLLVSGRDDDDSEAMI IDDDNSLEQPTPLDKYGLPLHCHTSTSSVLRDYHHNPLISGTNFQLSPVFGGSDSSRGDV ETGSVLSLDDSVPPGLTACDTDASSDSGIDENSMVDGASGSPRKRLTSSSTSTNQAESAP PALDVETPVTQKSVEEELEGCGSGSNAPSRKTSISFLDSSNPLLHTPAMMDLVNDDYIMG EGGFEFSDNQLEQVLGWPEIA NT seq 4746 nt NT seq  +upstreamnt  +downstreamnt atgtttaattccttcgagagctgcgatttctctggtcccggcgacaattccttctacggc gaagatgtgatccccggttctacttcctacgagtgcgatcccaagccgcagcagcagcgg cagcatcagctgagcaatggcccagcttttgggcgaatgcccatcaatgaacccactgtg aactttggcaacgggtcattctacaatggccctgctcccggaagccaaccctttgtgggc gccatactcggacccaatatgtcctccgctggtatgcaaaggtaccatccgtaccaccac cagcagccccaggacgccttctaccgccagaggggatcgctcctgaacgtggccacgccc tgccgcgaaagccgcccctggagctacgcctactgctacggctacgcccccacgaacacc caaccttgccagttcacccagttcgtcgacatcgaagacttcatgaacaatgaaaaacgc aaggaaaagtctcgcgatgcggccagatgtcgtcgctccaaggagacggagatattcatc gaactctcggctgctttgccattgaaaaccgacgatgtcaaccaactggacaaggcctcc gtgatgaggatcaccatcgctttcctcaagattcgcgagatgctgcagttcgtgcccagc ttgcgcgactgcaatgatgccattaagcaggacattgaaactgcagaggatcagcaggaa gtcaagcccaagctggaaatgggcagtgaggattggctaaacggagctgaggccagagag ctcctcaaacagaccatggacggatttctgctggtcttgtcccacgagggagacatcacc tacgtgtccgaaaacgtagtcgagtatctgggcatcaccaagattgacacacttggtcag cagatctgggagtactcgcaccagtgcgaccacgccgagatcaaggatgctctcagcctg aagcgtgaacttgcccagaaggtcaaggatgagcctcagcagaattctggagtgagcacc catcaccgggatctgtttgtgcgcttgaagtgcaccttgaccagtcgtggacgaagcatc aacatcaagagcgcttcgtataaggtcattcacatcacgggacacttggtggtcaatgcc aagggcgagcgtctgctgatggccattggccgacccattccgcatccgtcgaacattgag attccgttgggaaccagcaccttccttaccaaacactccctggatatgcatttcacctat gtggatgacaagatgcatgacttattgggatatttgcccaaggatctacttgacacctct ttgttttcgtgccagcatggagcagattccgaacgcctgatggccaccttcaagagcgtg ctgagcaagggacagggcgagacgtcccgctacagattcctgggaaaatacggtggctac tgctggattcttagccaggccacgatcgtctacgataagctaaagccgcagagcgtcgtt tgcgttaactacgtcataagtaatcttgagaataaacatgagatatactcacttgctcaa caaactgcggcaagtgagcaaaaggaacaacaccaccaagcagctgaaaccaagaaggag cccgaaaaaggaaccgatcccgaaataatccttcaggaaaccaaggaaacagcgaacaca cctattcccttagagctgcaagctaagcctctgcaaattgagagcgagaaagcagagaaa accatcgaggaaaccaaaacaactgcaacaatcccaccagtaactgcaacctcaacggct gaccagataaagcagctgcccgagagcaatccgtacaagcagatcctccaggcggagttg ctcatcaagcgggagaaccactcgccaggaccgcgcaccatcactgcccagctgctcagc ggcagtagcagcggactgcgtcccgaggagaagcgtcccaagtcggtgaccgcttcggtc ctccgcccgagtcccgctccacccctaacaccaccgcccacagcggtcctctgcaagaag actccgctcggcgtggagcccactctgccgcccaccaccaccgccacggcagccataatc tcctcgagcaatcagcagctgcagatcgcacagcaaacccaactgcagaatccccagcaa ccagctcaagatatgagtaaaggattctgctcgctgtttgccgacgatggacgaggtctg acaatgcttaaggaagaacctgacgatttgtcccaccaccttgcctccaccaattgcatc cagctggacgagatgactcccttcagtgacatgttggttggccttatgggcacctgcctg ctgcccgaggacataaattccctggactcgaccacctgctccacgacggccagcggccag cactaccagagccccagcagcagcagcacctctgcacccagcaataccagtagcaacaac aatagctatgccaacagtccgctcagcccgctcacacaaactcccacggcaaccgctagc aatcccagtcatcagcagcagcaacagcaacatcacaaccagcagcagcagcagcaacaa cagcagcagcatcatgcacagcaccacgacaacagcaacagcagcagcaacatcgatccg ctgttcaactatcgcgaggagtcgaatgacacaagctgctcgcagcacctgcattcgccc agcatcacatcaaagagtcccgaggacagcagcctaccatcgttgtgcagtcccaattca ctaacacaggaggatgacttctccttcgaggcctttgccatgcgtgctccctacatcccg atcgatgatgatatgcccctgctaacggagacggatctcatgtggtgcccaccagaggat ctgcagaccatggtgcccaaggagatcgacgccatacagcagcagttgcaacagctgcag cagcaacatcaccagcaatacgccggcaacactggctaccagcaacagcagcagcagcag ccgcaactccagcagcagcatttctccaactccctgtgctcctcgccagcttcaacggtc tcctcattgtcgccatcgcccgtgcaacagcatcatcagcagcaacaggcagcggtcttc accagcgattccagcgagctggcggcattgctgtgcggatccggaaatggaactctttcg atcctggctggaagtggtgttacggttgcggaggagtgcaacgagcggctgcagcaacat cagcagcagcaacagcagagtggcaacgagttcaggactttccagcagctgcagcaggag ttgcagttgcaggaggaacagcagcagcgtcagcagcagcaacaacagcagcagcagcaa cagcagttactcagcctaaacatcgagtgcaaaaaggagaaatacgatgtgcaaatggga ggcagtttatgtcatcccatggaggatgcatttgagaatgactacagcaaggactccgct aatctggactgctgggacctgattcaaatgcaagtggtggacacggaacccgtgagtccc aatgccgcatctcccgctccctgcaaggtgtctgccatccagatgctccagcaacagcag caactgccgcagcagaacatcattttgaatgcagtgccattgattaccatacagaataac aaggaattgatgcaacagcagcagcagcaggagcagctgcagcagccggctataaaactg ctaaatggagccagcattgcgccggtgaccaccaaggccaccatacgtctggtggagagc aagccgcccaccacgacgcagccgcgagtggcgaaggtgaaccttgtgccccagcagcag cagcaacatggaaacaagcgccatctgaacagcgcgacaggagcgggcaatcctgtggag tccaagcgcctgaagagcggaaccctctgcctggatgtgcagtcccctcagctcctccag cagctgattggcaaggatcctgcccagcaccaaacccaagcagccaagcgagcaggcagt gagcgctggcaacagtcggcggagagcaagcagcagaagcagcagcaacagcagtccaac tcggtactgaagaacctgctggtcagcggacgcgatgatgacgattccgaagcaatgata atcgatgacgacaactccctggagcagccaactccactggacaaatatggtttgcccctg cactgtcacacctccacgtcttcggtgctgcgggactatcaccacaacccgctgatcagt ggcaccaacttccagctgtctccagtcttcggaggctcagattccagtagaggtgacgtc gagaccgggtcagtgctttcccttgatgactcggtgccccccggcttgacagcctgcgac acggatgcctccagcgacagtggcatcgatgagaacagcatggtggacggggcatcgggg tcaccgcgtaagaggttgacctcaagctccactagcactaatcaggctgaatctgcacca ccggctttggacgtggagactccagtgacccagaagtcggtagaggaggagctcgaagga tgcggaagcggcagtaacgcccccagcaggaagacttccatttccttcctggacagcagc aatcccctgctgcacacgccggcgatgatggacctggtcaacgacgactacatcatgggc gagggtggcttcgagttcagcgacaaccagttggagcaggtcctgggttggccagaaatc gcctag

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