Drosophila sechellia: 6613190
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Entry
6613190 CDS
T01064
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
dse
Drosophila sechellia
Pathway
dse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6613190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dse03041
]
6613190
Spliceosome [BR:
dse03041
]
Complex A
U1 snRNP components
U1 related factors
6613190
Complex B
6613190
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
6613190
NCBI-ProteinID:
XP_032583417
LinkDB
All DBs
Position
2L:2968821..2972026
Genome browser
AA seq
806 aa
AA seq
DB search
MNVPPSVGNGGAPPGRGMGYTPPGAIVPQFPPPGFGAPPPPELAAAFGVMATSTEWTEHK
APDGRPYYYNQNTKQSSWEKPEALMTPAELLHNQCPWKEYRSDTGKVYYHNVATKETCWE
PPPEYVDMKAKAKAEEAAAAAKAVAAMTSSSLAGMVPPAALASILPAALPIAPRLPTPEI
HSPLTPSSNENSSSAMDQAMAATLAAIEVPQQNAKKDDKSDSAVVFKDKREAIESFKELL
RDRNVPSNANWDQCVKIISKDPRYAAFKNLNERKQTFNAYKTQKIKDEREESRLKAKKAK
EDLEQFLMSSDKMNSQMKYFRCEEVFAGTRTWTAVPEPDRRDIYEDCIFNLAKREKEEAR
LLKKRNMKVLGELLESMTSINHATTWSEAQVMLLDNAAFKNDVTLLGMDKEDALIVFEEH
IRTLEKEEDEEREREKKRMKRQQRKNRDSFLALLDSLHEEGKLTSMSLWVELYPIISADL
RFSAMLGQSGSTPLDLFKFYVENLKARFHDEKKIIREILKEKAFVVQAKTSFEDFATVVC
EDKRSASLDAGNVKLTYNSLLEKAEAIEKERMKEEVRRLRKLENEIKNEWLEANVSVAEP
YESAKKLVEHLEAFALYEKEIGVEKIWEDFVKESEDACSHHHSRSRKSKKNKKHKKRVRS
VSRSDIENEHIEVEKSKRRLSKTRSHSLTSIGSIESEKLLKKKKKRKNKLRGSSCESEVP
GIQSPGTQALLQNDSNSHSPAKKKKKEKRAKKDKRHNRHNRSGTPLSPAQSVESAGSRNE
ELTLSDGELESKRAALLAQLSEQLDE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcctcctagcgtgggcaatggaggagcgccaccgggaaggggcatgggctac
acgccgcccggtgcaatcgtgccgcagtttccaccacccggattcggggccccacccccg
ccggagctggccgccgccttcggggtgatggccaccagcaccgagtggacggagcacaag
gcgccggacggacgcccatattactacaatcagaacacgaagcaaagctcgtgggagaag
cctgaggctcttatgacgcccgccgagctgctgcacaaccagtgtccctggaaggagtat
cgctctgatacgggaaaagtgtactaccacaacgtggccaccaaggagacctgctgggag
ccgccgccggagtacgtggacatgaaggctaaggcgaaggcggaagaagctgctgctgct
gccaaagccgtggcagccatgacatcatccagcttagccggcatggtgccacccgctgct
ctggctagcattcttcccgctgccctgcctattgccccccgattacccactcctgagatt
cactcgccgctgacacccagcagcaacgagaactcgtcctcagcgatggatcaagccatg
gccgccacgttagctgctatagaggtgccacaacaaaatgctaagaaggacgacaagtca
gatagcgctgtggtgtttaaggataaacgcgaggccatcgagtccttcaaggagctgctg
cgggaccgcaatgtgccatcaaatgcgaactgggaccagtgtgtgaaaatcatatcaaag
gatccgcgctacgcagcctttaaaaatctgaacgagcgcaagcaaacattcaatgcctac
aagacgcagaagattaaggacgagcgagaggagtctcgactaaaagccaagaaggcaaaa
gaggacttggagcagttccttatgtccagcgataagatgaactcgcagatgaaatatttt
cgctgtgaagaagtgtttgccggaacgcgaacatggaccgcggtgccggaacctgatcgg
cgcgatatatacgaggactgtatatttaatttagcgaagcgagagaaggaagaagcgcgg
ttgctaaaaaaacgcaacatgaaggttctgggcgagctgctggagtcgatgacttcaatc
aatcatgccaccacctggtcagaggctcaggttatgctattggacaacgcagcatttaaa
aatgatgtgaccctgctgggtatggacaaggaggacgcccttattgtcttcgaagagcac
attcgtaccttggagaaggaggaggacgaggaacgtgagcgggaaaagaagcgcatgaag
cgacagcagcgcaaaaacagggactcctttctggcgctactcgactccctgcatgaagag
ggaaagctcacttccatgtcgttgtgggtggagctgtatcccatcatatcagccgatctg
cgattctccgctatgctcggccagagcgggtctacacccctggatcttttcaagttctat
gtggaaaacctgaaagcccgcttccatgatgaaaagaaaataataagggagatcctcaag
gaaaaagcatttgttgtccaggcgaagacatccttcgaggactttgccacggtcgtgtgt
gaagataagcggtcagccagcctggacgcgggaaatgtgaagctcacatacaactccctg
ctggaaaaggcagaggccatcgaaaaggagcggatgaaagaggaggtgcgaaggttgcgg
aaacttgaaaatgaaattaaaaacgaatggctggaggcgaacgtctcagtggccgaaccc
tatgagagcgccaagaagctggtggagcaccttgaagcatttgccctgtatgaaaaggaa
atcggtgtggagaagatctgggaggactttgttaaggaaagcgaagatgcgtgcagccat
catcactcgcggtcacgcaaatctaagaaaaacaagaagcacaaaaaacgagtacggtcc
gtctcaagatcagacattgagaatgagcatatagaagtggagaagtcaaagcgaaggctc
tccaagacacgatcgcattccctgacctcaattggcagcatcgagagcgaaaaattactg
aagaagaaaaagaagcgcaagaacaaactgcgaggttcctcgtgcgaatcggaggttcca
ggcatccagtcgccgggaactcaagctctcctccagaacgactcaaactcgcactcaccc
gcgaagaaaaagaagaaggagaagcgagctaagaaggacaagcgacacaataggcacaat
cgatccggcacgccccttagtcctgcccagtccgtcgagtcggctggatcgcgaaacgag
gagctgacgttaagtgacggcgagctggaatcaaagcgagcggctcttctagcccaactc
agcgagcagctggacgagtga
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