Drosophila sechellia: 6613428 Help Entry 6613428           CDS       T01064                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism dse  Drosophila sechellia Pathway dse04512   ECM-receptor interaction dse04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:dse00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     6613428  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     6613428  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:dse04147]     6613428    00536 Glycosaminoglycan binding proteins [BR:dse00536]     6613428 Exosome [BR:dse04147]  Exosomal proteins   Exosomal proteins of other cancer cells    6613428 Glycosaminoglycan binding proteins [BR:dse00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    6613428 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  6613428 NCBI-ProteinID:  XP_032581231 LinkDB All DBs Position 2L:complement(4922393..4937583) Genome browser AA seq 1916 aa AA seqDB search MLPRDLRHLSGLLGAVYLLGSLVSVTLADGKICNTTLCDCKGIKGRMGAQGPIGIFGLEG PAGDIGPFGRAGPIGEKGDVGEYGEQGEKGHRGDVGPKGEMGYPGIMGKSGEPGTPGPRG IDGCDGRPGMQGPSGAPGQNGVRGPPGKPGQQGPPGEAGEGGINSKGTKGNRGETGQPGG MGPPGFDGDRGSKGDTGYAGLTGKKGDPGLPGPKGDTGDVSELPYSLIGPPGHKGDPGDS LSGVLKPDDTLKGYKGYVGLQGDEGPQGPTGEQGAVGRNGLPGARGEIGGPGERGKPGKD GEPGRFGDKGMKGAPGWTGADGLDGSPGERGEDGFAGMPGVQGGAGSPGIYDPSLTKSLP GPIGSQGDIGPPGEPGPPGLPGKPGRRGPIGLAGQSGDPGLSGSRGPPGRSERGEAGDYG FIGPPGPQGPPGEAGLPGRYGLHGDPGQNVVGPKGESGLNGLPGLEGYRGDRGEVGLPGD KGLPGEGYNIVGPPGSQGPPGFRGLPGDDGYNGLRGLPGDKGLRGDDCPVCNAGPRGPRG QEGDTGYPGSNGNRGAIGLSGPRGVQGLKGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDG RKIELGPLRKGEIGDIGDSGRRGDQGDYGENGRDGSIGSQGERGETGQRGDYGDAGSQGR DGEPGRDGRDGAPGRNATTPKVYLIGEPGYDGIKGELGDDGDTGFKGVKGEPNPGQIYDN TGGPGEDGYTGPKGVKGAKGKQGDIGLRGEIGDRGPAGEVIPGLVGAKGYPGQTGDYGPQ GAPGLAGRDGEPGLDGGLGYKGQRGVPGQEVIQGEIGPPGRSGIKGFPGDVGAPGQYGLA GRPGPKGVKGEHGPDGAVGQTGLPGNKGQRGDFLVGRPGPKGQPGRIGRKAPHGAKGQKG EVGSLGQNGQNGAKGSIGFSGRRGLLGNAGLQGLPGSPGIPGLPGMIGEIGERGEIGYNG RQGDIGPRGPNGELGPKGLSGDDGPDGYPGANGLPGRKGEQGNPGFPGRTGAKGVAAYSG IKGDDGESGLTGPIGYPGAPGVKGQRGAVGDSQPALDGVAGRKGEVGSPGLNGLPGRHGL KGQRGDRGLAGQQGRPGEPGANGLGGYPGRNGVNGLKGATGFTGPQGPKGPQGERGVVGL DGRTGQIGDQGPRGLIGAQGEQGEQGDKGEVGFPGRLENLQDLSFYRGFTGDRGLQGERG EQGDMGPIGLIGPPGAKGESGDIGYAGQLGFDGADGLKGFQGDQGPRGPPGITLPTEKGD EGVAGLDGRAGRPGHFGQKGAPGPPGENGPNGAIGHNGPQIQGPPGPQGDVGFPGAAGNN GRHGLIGPKGKLGEMGRQGERGESGYAIVGRQGDIGDIGFQGEPGWDGAKGEQGYPGLPG KNGRMGAPGPRGPTGDAGWGGIDGMDGLVGPKGQPGVTYSYSMARPGDRGEPGLDGFQGE EGDAGAPGLIGFQGQRGAMGYRGDQGEVGYSGADGPQGQRGDKGYIGLTGAPGHRGLPGL QGDPAPAAPAPKSRGFIFARHSQSVQVPRCPANTNLLWEGYSLSGNVAASRAVGQDLGQS GSCMMRFTTMPYMLCDFNGICHFAQNNDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVV CETTTRIIALHSQSMSIPECPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRA QPVIECHGHGRCNYYDALASFWLTVIEEQDQFVQPRQQTLKADLTSKISRCTVCRRRGNT FVARTAYGSSGSRDGSASRYPSGGSSGAAGSLPETDGDYRSSWTSGAASSPGSNSGSWSS GSNAGAYPGSNAAWQSRTNAGSSWSSRPVAGSGSNPGSYSSWSTGSSPGSNPGSNSWSTR PSWSTDPRSRAPSNYLNGRYQQSVRPSNLQAYNEYVRHGGNTRQYNRRPREDTTAP NT seq 5751 nt NT seq  +upstreamnt  +downstreamnt atgttacccagagatctaaggcatctctcgggacttctgggcgccgtttatctgttgggc agcctggtttccgttaccttggcggatggaaagatctgcaacacaacgctatgcgactgc aaaggaatcaagggacgcatgggcgcccaaggacccatcggaatttttggcttggaagga cctgccggtgatattggaccatttggacgagcaggaccaatcggcgagaagggagatgtc ggcgagtatggcgaacaaggcgagaaaggacatcgcggcgatgtcggacctaaaggtgaa atgggttaccctggcattatgggtaaaagcggtgagcccggaacaccaggaccacgtgga atcgatggctgcgacggacggcctggtatgcagggtcccagcggagcacctggccagaac ggcgttcgcggtccgccaggaaagcccggtcagcagggtccacccggagaggctggcgag ggcggcatcaactccaagggcaccaagggcaatcgaggcgagactggacagcccggcggt atgggaccgcccggattcgacggtgatcgcggtagcaagggtgacactggttacgctggc ctaaccggcaagaagggagatccgggactgccgggacccaagggtgacactggcgacgtt tcggagctgccctactcactgattggaccgcctgggcacaagggtgacccaggtgacagc ctatccggagtgctgaagccagatgacaccttgaagggctacaagggatacgtgggactc cagggcgatgaggggccacagggaccgaccggtgaacaaggcgccgttggccgcaatgga ctgcctggtgcaagaggtgagatcggaggacccggagagcggggcaagcccggtaaggat ggtgaacccggtcgattcggtgacaagggcatgaaaggtgcgcccggctggactggagct gatggattggacggaagcccaggagagcgtggagaggatggattcgccggcatgcctggt gttcaaggaggcgctggttcccccggaatttacgatcctagtctcaccaaatcgctgccc ggcccgattggatcacagggagacatcggaccgcccggagaaccaggtccaccaggtctg cccggcaaacctggacgccgcggacccatcggtctagctggtcaatcaggagaccccggc ttaagcggcagtcgcggaccgcctggacgtagtgagcgcggtgaggccggagactatgga ttcattggcccaccgggaccgcagggaccccccggcgaagctggtctacccggccgatac ggactgcacggagaccctggacaaaatgtggtcggaccaaagggcgagtctggcctaaat ggattacctggtttggagggctatcgcggcgatcgcggagaggtcggcttgcccggtgac aagggtctgcccggcgagggctacaacatcgttggtcctcctggttcccagggaccgccc ggtttccgtggacttcccggtgacgatggttataacggattgcgtggactgcccggtgac aagggattgcgcggtgacgactgccccgtgtgcaatgccggaccccgaggaccccgtggc caggagggcgacaccggctatccgggtagcaatggaaaccgtggagctattggcctctct ggaccgcgtggcgtacagggcttgaaaggtaaccccggaagggctggtcacaaaggtctg cccggtccagcgggtattcccggcgagccaggcaaagttggagcagccggacccgatgga aggaagatcgaattgggccctttaaggaagggcgaaatcggtgacatcggcgacagtgga cgtcgcggagatcagggtgactacggtgaaaatggacgggatggatccattggtagccag ggcgagcgcggagaaaccggacagcgcggcgactacggcgatgccggttcccagggacgc gatggtgagccaggacgcgatggtcgtgatggagctcccggtagaaacgccaccacaccc aaggtctacttgatcggcgagccgggatatgacggaataaagggcgagctcggcgacgat ggtgataccggtttcaagggcgtcaagggtgagccgaatcctggtcagatctacgacaac actggtgggcctggcgaggatggttataccggaccgaagggcgtgaagggagccaaggga aagcaaggcgatattggacttcgtggcgaaattggtgaccgtggcccggctggcgaagtt attcccggactcgtgggtgccaagggttatcccggccaaactggcgattacggaccgcag ggagctccaggattggctggtcgcgatggtgaacctggcttggatggaggccttggatac aagggacagcgcggtgtacctggtcaggaggtgatccagggtgagattggaccaccgggt cggtcaggcattaagggcttccccggtgatgtcggcgcacccggccagtatggactcgcc ggacgcccaggacccaagggagtgaagggcgagcatggacccgatggcgctgttggacaa acaggactgcctggcaacaagggccagcgcggtgacttcctggttggtcggcccggacca aagggtcagcccggacgcattggtcgcaaggcaccgcacggcgccaagggccagaaggga gaggtgggctcgctgggccagaatggacagaacggcgccaagggcagcatcggtttctct ggccgtcgtggactcctcggcaatgcgggtctgcagggactgcctggtagtcctggcatt cccggtcttccaggaatgattggcgagatcggagagcgtggtgagattggatacaacgga cggcagggtgacatcggacctcgtggacccaacggcgagcttggacccaaaggtctctct ggtgatgatggaccggatggctatcccggagctaacggccttcccggacgcaagggtgag caaggaaatcctggattcccaggacgtacaggcgcgaagggcgtggccgcctacagtggc ataaagggtgatgacggagaatccggcttgaccgggcccatcggataccccggagctccc ggagtgaagggacagcgtggggccgttggagattcgcaaccagctctcgatggagttgct ggccgcaagggagaagtaggcagtccaggactcaatggacttcccggtcgccatggacta aagggacagcggggagatcgcggtctcgccggccaacagggtagaccaggagagccagga gccaacggattgggcggctatcctggacgcaatggagttaatggcctgaagggcgcaact ggttttactggaccccagggacccaaaggtcctcagggcgagagaggagttgtgggcctg gatggtcgaactggtcagattggtgatcaaggaccacgcggattgattggagcgcaggga gagcagggtgagcagggtgacaaaggagaagtcggcttcccaggtcgcttggaaaacctg caggatctgagcttctatcgcggcttcaccggagatcgaggactacagggtgaacgtggc gagcagggagatatgggaccaattggcttaattggacctcccggcgccaagggcgaaagc ggtgacattggctatgctggacaacttggattcgatggagctgacggccttaagggattc cagggtgaccaaggaccacgaggtccaccgggcataacattgccaaccgagaaaggtgac gaaggcgttgctggactcgatggacgagcaggacgtccgggacactttggccagaaggga gcacctggtccaccgggagagaatggacccaacggtgcgatcggacacaatggaccccag atccaggggccacctggacctcagggagatgtcggctttcccggagcagcgggaaacaat ggtcgtcatggactaatcggaccaaagggaaagcttggagaaatgggtcgccagggtgag cgaggtgaatctggatatgccattgttggcagacagggcgacatcggagatatcggcttc cagggcgaacctggctgggatggcgccaagggcgagcaaggatatcccggacttccgggt aagaacggaagaatgggtgccccaggaccacggggacccactggcgacgccggctggggt ggaatcgatggcatggacggactcgttggccccaagggtcaaccaggtgtaacttactcc tactccatggcccgacccggagatcgtggtgagcccggacttgatgggttccagggcgag gaaggcgatgctggagcaccaggacttattggattccagggacagagaggtgccatggga tatcgcggtgaccagggcgaggtgggctactccggagccgatggaccgcagggacagcgt ggtgacaagggttatattggcttgaccggagcacccggccatcgtggtctgcccggacta caaggtgacccagcgccagcagcgccggcgcccaagagccgcggattcatcttcgcccgc cactcgcaatccgtccaagtgcctcggtgtccggccaacacgaatctgctttgggagggc tactcactgtccggcaacgtggccgccagcagagcggtgggtcaggatctcggtcagtcc ggctcctgcatgatgcggtttaccaccatgccgtacatgctgtgtgacttcaacggcatt tgtcactttgcccagaataacgatgacagtctctggctgtccaccgccgagcccatgcca atgaccatgacgcccatccaaggcagggacctcatgaagtacatctcgcgttgcgttgtg tgcgagacgacgaccaggatcatcgccctccactcgcaatccatgtccattccggagtgc cccggcggctgggaggagatgtggaccggctacagttacttcatgagcacgttggacaac gtcggaggcgttggacagaaccttgtctccccgggctcttgcttggaggagttccgcgcc cagccagtgatcgagtgccatggccatggacgctgcaactactacgatgcgctggcctcc ttctggttaaccgtcatcgaggagcaggatcagttcgtccagccgcgccagcagacgcta aaggcggatttgaccagcaagattagcaggtgcacggtttgccgtcgtcgaggcaacacc tttgtggctcgcactgcatatgggtcttccggttccagagatggctctgcctcgaggtat ccctcgggtggttcctcgggcgcagctggatcacttccggagacagatggcgattacagg tcaagctggacttcgggcgcagcttccagtcctggttccaactcaggatcctggtcatct ggatccaatgccggagcttatcccggctccaacgccgcctggcaatcgaggaccaatgct ggatctagctggtcttccagacccgtagcaggatcgggctccaatccgggatcgtactct agctggtccactggctccagtcctggttccaatcccggatccaactcctggtccacgcgc ccctcttggagcacagatccgcgcagtcgcgccccatcaaactatctgaacggaaggtac cagcaaagtgttcgcccgagcaacctgcaggcctacaatgagtacgttcgccatgggggc aatacccgccagtacaaccgacgcccccgcgaggacaccaccgccccctag

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