Drosophila sechellia: 6613430 Help Entry 6613430           CDS       T01064                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism dse  Drosophila sechellia Pathway dse04382   Cornified envelope formation dse04512   ECM-receptor interaction dse04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:dse00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     6613430  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     6613430  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     6613430  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:dse04147]     6613430    00536 Glycosaminoglycan binding proteins [BR:dse00536]     6613430 Exosome [BR:dse04147]  Exosomal proteins   Exosomal proteins of other cancer cells    6613430 Glycosaminoglycan binding proteins [BR:dse00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    6613430 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  6613430 NCBI-ProteinID:  XP_002037904 UniProt:  B4I1B5 LinkDB All DBs Position 2L:4939962..4947424 Genome browser AA seq 1776 aa AA seqDB search MLPFWKRLLYAAVIAGALFGADAQLWKMSGTSGSIQDSVKHHNRNEPKFSIDDSYDIVSS AGNLPPKNCTAGYAGCVPKCIAEKGDRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDP GPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGDVGLSGLEGLSGMP GPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGLPGEKGERGDSGPY GAKGPRGEHGLKGEKGASCYGPMKPGAPGMKGEKGEPASSLPSKPTHTVMGPRGDMGQKG EPGLVGRKGEPGPEGDTGLNGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGEPGLNG LPGKPGQRGEPGRAGATGQPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGTPGPQGLSGAD GLPGSQGYNGQKGGAGLPGRPGNEGPPGKKGDKGTAGLDGPKGSIGPIGHPGPPGPEGQK GDAGLPGYGIQGSKGDAGIPGYAGLKGSKGERGFKGNAGAPGDSKLGRPGTPGTAGAPGQ KGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLAGVPGKDGARGPPGERGY PGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPVKGEKGYPGAPGA KGVKGFRGSDGQSGSPGPKGEFGFKGDKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEP GFHGRDGAKGDKGSLGPSGERGEPGSCALDEIKMPAKGNKGEPGQTGMPGPPGEYGSPGE RGYTGLKGNTGPQGPPGVEGPRGLNGPRGEKGNQGAVGVPGNPGKDGLRGIPGRNGQPGP RGEPGISRPGPMGPPGLNGLQGEKGDRGPTGPIGLPGADGSVGYPGDRGDAGLPGVSGRP GIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGLDGAKGEPGSPGLVGMPGNKGDRGAPGND GPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATGLTGNDGPVGGRGPPGAPGLMGIKGDQ GLAGAPGKQGLDGMPGEKGSQGFSGLDGAPGLPGDASEKGQKGEPGPSGLRGDTGPAGQP GWPGEKGMPGLAVHGRPGPQGEKGDQGRSGIDGRDGINGDKGEQGLQGVWGQPGEKGSVG APGIPGTPGMDGLPGAAGTPGAVGYPGHRGDKGEPGLSGLPGLKGETGPVGLQGFIGAPG PKGERGIRGQPGLPATIPVDFRGDKGSQGERGYTGEKGDQGERGLSGPVGDAGAKGDRGL QGPPGASGLNGIPGAKGDTGPRGEIGYPGATIKGEKGLPGRPGRNGRQGFIGAPGTIGER GLPGLPGEPGLVGLPGLIGPAGSKGERGLAGSPGQPGQDGFPGGPGLKGDTGPQGFKGER GLNGFEGQKGDKGDRGLQGPSGLPGLNGQKGDTGYPGLVGNEGPVGAPGERGFTGPKGHD GRDGTPGQPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGER GLIGETGNVGRQGPKGDRGEQGERGYEGAIGLIGQKGEPGAPAAAALDYLTGILITRHSQ SETVPACSAGHTELWTGYSLLFVDGNDYAHNQDLGSPGSCVQRFSTLPVMSCGQNSVCNY ASRNDKTFWLTTNAAIPMMPVANNEIRQYISRCVVCEAPANVIAVHSQTIAVPDCPNGWE SLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCHFYETLTSFWMY NLDSSEPFDMPQQQTIKSGKQQSYVSRCQVCMKNSS NT seq 5331 nt NT seq  +upstreamnt  +downstreamnt atgttgcccttctggaagcggctgctatacgccgctgtgatcgcgggagcgttattcggt gccgacgctcaactttggaagatgtctggtacgtccggttcaattcaggactccgtgaaa caccacaatcgaaatgaacccaagttctcaatcgacgacagttacgacattgtgagctct gccggcaatctgccgcccaagaattgtacggccggatatgcgggctgtgtgcccaagtgc atagcggagaagggcgaccggggtctgccgggccctctgggacccacgggactgaagggc gagatgggtttccccggcatggagggaccctctggagacaagggtcagaagggtgatccc ggcccatacggacagcgtggtgataagggtgagcgcggatcgcctggtctacatggtcag gctggtgtacccggagttcagggacccgccggcaatcctggtgcccctggtatcaacggc aaagacggttgcgacggagatgttggtttatccggcttggagggtctatccggaatgccc ggacctcgcggatatgccggccagcttggcagcaagggcgagaagggtgaaccggcaaag gagaacggtgattacgcgaagggcgagaagggtgagcctggttggaggggcactgccggc ttggctggaccacagggattacctggcgaaaagggcgagcgcggcgacagcggaccttac ggagccaaaggaccccggggtgagcacggtctgaagggagagaagggtgcctcctgctac ggacccatgaagcccggtgcaccaggtatgaagggcgagaagggtgaaccggcgtcatcg cttccaagcaagccgacgcacacggtgatgggacctcgcggcgacatgggacagaaggga gagcctggcctagtgggccgcaagggtgagcccggacctgaaggcgacactggactcaat ggacagaagggcgagaagggtctgcccggcggccctggcgatcgtggtcgccaaggtaac tttggacccccaggctctacaggacaaaagggagatcgtggcgagccgggtcttaatggt ctgcccggtaaacccggacaaaggggtgagccaggacgcgctggagcgacaggtcagcct ggtctgctcggtcctccgggaccgccgggcggtggccgtggaacaccgggacccccggga cccaaaggaccccgcggctacgttggcacacctggaccccagggattaagcggagctgat ggacttccgggttcacagggatacaatggacaaaagggaggtgctggtctgcccggacga cccggcaacgagggacctccaggcaaaaagggagataagggaaccgcaggacttgatgga ccaaagggatccatcggacccattggacacccaggaccaccgggtccagagggacagaag ggcgacgctggtttgcccggttatggcattcaaggatctaagggagatgcaggcataccc ggttatgccggactaaagggtagcaagggagagcgcggcttcaagggcaatgctggtgct cccggtgactccaagctgggccgtcctggaactcccggtaccgctggtgctcctggacaa aagggagatgctggtcgtcccggcactcctggccaaaagggagacatgggcatcaaggga gacgtcggcggcaaatgctcatcgtgcagggccggaccaaagggtgataagggaacgagc ggactggctggagttcccggaaaggacggcgcacgaggaccgcctggagagcgcggatat cccggagaacgtggacacgatggaatcaacggacaaactggaccgcctggtgagaaggga gaggacggtcgcactggtcttcccggagccactggagagcctggcaaacctgcactttgc gatttgagtttgattgagcccgtgaagggtgagaagggttaccctggtgcgccaggtgca aagggcgtgaagggattcaggggatcagacggtcagtctggtagccctggacccaaagga gaattcggattcaagggtgataagggcttgagcggagcacccggcaatgacggaacaccc ggacgcgctggacgagacggataccccggaattcctggtcaatccatcaagggcgagcca ggcttccatggaagggacggagcaaagggcgacaagggatcattaggcccaagcggcgag aggggagagcccggtagctgtgcgcttgacgaaataaagatgcccgctaagggtaacaag ggtgagcccggccaaaccggcatgccaggacctccaggcgaatacggcagcccgggagag aggggctataccggattgaagggcaacactggaccacagggacctcctggcgttgaggga ccccgcggcttgaatggacctcgcggtgaaaagggcaaccagggcgctgtcggagtccct ggtaatcctggcaaggacggccttcgcggcattcccggacgcaatggacagcctggaccg aggggagagcctggtatttcgagacccggccctatgggcccacccggtctgaatggtctg caaggtgagaagggtgaccgtggtccaaccggacccattggtcttcccggtgccgatggc agtgtgggatatcctggagatagaggcgatgccggtctgcccggagtatctggacggccc ggaattgttggtgagaagggagacgtgggcccgatcggccccgctggtgttgccggacct cctggtgttcctggtattgatggtgtgcgtggacttgatggcgccaagggtgagcccggc agtcccggattggtcggcatgcccggcaacaaaggtgaccgtggcgctcctggaaatgac ggacccaagggctttgctggcgttactggtgctcccggaaagcgcggacctgctggtatt cctggagtttccggtgccaagggtgacaagggagctactggcttgactggcaatgatgga cctgtgggaggccgcggtcctccaggtgctcctggcctgatgggcattaagggtgaccaa ggattggcaggagcccctggaaaacaaggactggacggtatgcccggcgaaaagggtagc caaggattctccggtctggatggagctcctggtttgcctggtgatgcctccgagaaggga caaaagggtgaacccggtccatccggactccgcggcgatacaggtccggccggacagcca ggttggccaggagagaagggtatgcccggtctggctgttcacgggcgccccggtccgcag ggcgagaagggtgaccagggacgcagtggaatcgatggacgcgatggaattaacggcgat aagggtgaacaaggtctgcagggcgtttggggccagcctggcgagaagggatctgtcggc gcacccggcattcctggtacccccggaatggatggcttgcccggcgctgctggtacccct ggtgctgttggctatcctggccaccgtggtgacaagggagagcctggtctatctggtctg cccggactcaagggtgagactggacccgtcggactgcagggcttcatcggtgctcctggc cccaagggtgagcgcggtattcgtggtcaacccggtcttccggccaccatccccgtggac ttccgtggtgataagggatcccagggcgagcgcggctacactggcgagaagggcgatcaa ggcgaacgaggcttgagtggtcctgttggcgacgctggagccaagggagatcgcggattg cagggaccacctggtgcaagcggattaaatggtattcccggagccaagggagacactggt ccaagaggcgagatcggttatccaggagctaccattaagggcgagaagggtctgcccggt cgcccaggcagaaacggacgtcaaggttttattggagcccccggtacaattggagaacgc ggtctgcccggcttgcccggagagcccggccttgtgggcctacctggactcattggacca gctggcagcaagggagagcgtggcctcgccggcagtcccggacaaccaggacaggatgga ttccccggcggacctggattgaagggagatactggaccgcagggcttcaagggagaacgt ggtctaaatggcttcgagggacaaaagggagacaagggtgaccgaggactccaaggaccg tcgggactgcccggcttgaatggacagaagggagacaccggctaccctggcttagttgga aacgaaggacctgtcggagctcctggcgagcgcggcttcaccgggcccaagggacacgat ggacgtgacggaacaccaggtcagcctggacagaagggtgaaccgggaatgctgccacca ccgggacccaagggcgaacctggtcagccgggacgcaatggacctaagggagagcccgga cgtccgggagagcgtggcttgattggcatccagggtgagcgtggcgaaaagggtgagcgc ggcctgatcggtgagactggaaacgtgggacgccagggacccaagggagatcgcggagag cagggcgagaggggctatgagggcgccattggtttgatcggccagaaaggtgaacccgga gctccagctgccgccgctcttgactacctcactggtatcctgattacgcgacacagtcaa tcggaaacggtgcccgcttgctcggctggacacacggaactgtggacgggttactccctg ttgttcgtcgatggcaatgactatgcccacaatcaggacctcggatctcccggatcctgt gtgcaacgcttctcaacgctgcccgtaatgtcctgtggtcagaacagcgtctgcaactac gcctccagaaatgataagaccttctggctgacaaccaacgccgccattccgatgatgccc gttgcaaacaacgagatccgccagtacatctcacgttgcgtcgtttgtgaggcgccggct aatgtgatcgccgtgcacagtcaaacgatagcggtgcccgactgtccgaatggctgggag agtctctggattggctacagtttcctcatgcacactgccgtgggcaacggtggcggtgga caggcgctgcaatcgcctggctcctgtttggaggacttccgcgcaacgcccttcatcgag tgcaatggcgccaaaggcacgtgccacttctacgagacgttgaccagcttctggatgtac aacctggattcctcagagccgttcgacatgccacagcagcagacgatcaagtccggtaag caacagtcgtatgtgtccaggtgccaggtgtgcatgaagaactcctcgtag

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