Drosophila sechellia: 6613882
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Entry
6613882 CDS
T01064
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
dse
Drosophila sechellia
Pathway
dse03030
DNA replication
dse03410
Base excision repair
dse03420
Nucleotide excision repair
dse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
6613882
03410 Base excision repair
6613882
03420 Nucleotide excision repair
6613882
03430 Mismatch repair
6613882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dse03032
]
6613882
03400 DNA repair and recombination proteins [BR:
dse03400
]
6613882
DNA replication proteins [BR:
dse03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
6613882
DNA repair and recombination proteins [BR:
dse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
6613882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
AAA_30
BRCT_2
AAA_14
PTCB-BRCT
RuvB_N
RCF1-5-like_lid
Rad17
AAA_33
AAA_18
AAA_17
AAA_5
nSTAND3
T4bSS_IcmS
IstB_IS21
AAA_16
NPHP3_N
RNA_helicase
AAA_11
Motif
Other DBs
NCBI-GeneID:
6613882
NCBI-ProteinID:
XP_002038351
UniProt:
B4I3U5
LinkDB
All DBs
Position
3R:3766899..3770353
Genome browser
AA seq
980 aa
AA seq
DB search
MQRGIDSFFKRLPAKSKSAEDENGETPSKAPKRKKAVIISSDEEEVVSPPETKKLKASKT
ASSEDEVVAATPEPNAKKARNGQKLALSKLKRHVDPTELFGGETKRVIVPKPKTKAVLEF
ENEDIDRSLLEVDLDESIKEAAPEKKVQSNTRSSPSPKRAKKSSPEPPKPKSTKSKATTP
RVKKEKAAADLESSVLTDEERHERKRASAVLYQKYKNRSSCLNPGSKEIPKGSPDCLSGL
TFVVTGVLESMEREEAESVIKEYGGKVMTVVGKKLKYLVVGEEAGPKKLAMADELNIPIL
SEDGLFDLIREKSGNAKLVKEEKKNPEEKEKKEVKTSRRSNDKKEKEVTKQKSSEKHDAA
KHKVKEEHTSPKESKEKLNDVPAVTLKVKKEPGTQKEHAPSPRTAEPKTQDMVGMAWVDK
HKPTNIKEIVGQAGAASNVTKLMNWLSKWYVNHDGNKKPQRPNPWAKNDDGSFYKAALLS
GPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFTGQGQAV
SRKHVLIMDEVDGMAGNEDRGGMQELIALIKDSSIPIICMCNDRNHPKIRSLVNYCYDLR
FQRPRLEQIKGKIMSICFKEKVKISPAKVEEIIAATNNDIRQSINHIALLSAKEDASKKS
GQQIATKDLKLGPWEVVRKVFTADEHKHMSFADKSDLFFHDYSLAPLFVQQNYLQVLPQG
NKKDVLAKVAATADALSLGDLVEKRIRANSAWSLLPTQALFSSVLPGEHMCGHFTGQINF
PGWLGKNSKSGKRARLAQELHDHTRVCTSGSRLSVRLDYAPFLLDNIVRPLAKDGQEGVP
AALDVMKDYHLLREDLDSLVELTSWPGKKSPLDAVDGRVKAALTRSYNKEVMAYSYSAQA
GIKKKKSEAAGADDDYLGESPGEEDGDGGHISSEEDEDKDNLELDGLIKAKKKTTSSKAA
GGSKKATTSTASKSKAKAKK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcggcattgactccttcttcaaacggctgccggccaagtcgaaaagtgccgag
gacgaaaatggagagacgccgtcgaaggcgccaaaacgcaagaaagccgtgataatttcc
agcgacgaggaagaggtggtcagtccgccggagaccaagaaactcaaggcttcaaagaca
gcatccagcgaggatgaagtggtggctgccacaccggaaccgaatgcgaagaaggccagg
aacgggcagaaactagcgctttccaagcttaagcggcacgtggatcctaccgagcttttc
ggtggagaaaccaagagagttattgtgcccaaaccgaagaccaaagctgttctcgagttc
gagaacgaagacattgaccgcagtttattggaagtggatctggacgagagtatcaaagag
gctgcccccgaaaaaaaggttcagtcgaataccaggagctctccctcacctaaaagagca
aagaaaagcagcccggaaccgccaaaacccaagtcaaccaaatccaaagccaccactcct
cgtgtgaagaaggagaaagctgcggcagatctggaatccagtgtcttaacagacgaagaa
cgccacgagcgtaaacgtgcttccgccgtgctctaccagaagtacaaaaaccgcagttcg
tgcctgaaccccggcagcaaggaaatcccaaagggatccccggattgtctgagtggctta
acctttgtcgtaaccggagtccttgagtccatggaacgagaggaggcggagtctgtgatc
aaggagtatggcggaaaggtgatgaccgtggttggaaagaaacttaagtatttggtcgta
ggagaagaagctggaccaaagaaattagctatggctgatgaactcaatatacccattctc
agcgaggacggtctcttcgatctaatcagggagaaatcaggaaacgctaagctggtaaag
gaagagaagaaaaaccctgaagagaaagagaaaaaggaagtcaagacttcaagaaggtcc
aatgataaaaaggagaaggaggtcactaagcagaaaagtagcgagaagcatgatgctgcc
aaacataaagtcaaagaggaacacacttcccccaaggagtcaaaggaaaagctcaatgat
gtaccagctgttaccttgaaagtaaaaaaagagcccggcacccagaaagaacacgctccg
tcgccaagaactgcagaaccgaagactcaggatatggtcgggatggcctgggtggacaag
cacaagcctacgaacataaaagaaatcgttggccaggcaggagccgccagcaacgtgacc
aagctgatgaactggctgtccaagtggtatgttaaccatgatggaaacaagaagccccaa
cgtcccaatccttgggccaagaacgacgacggcagcttctacaaggcggccctgctttcg
ggacctcctggaataggaaagactacgacggcgactctggtagtgaaggaacttggcttc
gatgcggtggagttcaacgcctccgacacacgcagcaaacgcttgctcaaggatgaagtg
tccacgctgttgagcaacaaatccctctccggttactttacaggacaaggccaagcggtc
tcccgcaagcatgtgctcataatggacgaagtcgatggcatggccggtaacgaggaccgc
ggtggaatgcaggagctgatcgccctcatcaaggatagctctattcccattatttgcatg
tgtaatgatcgcaaccacccgaaaattcggtcgctggttaactattgctacgatctgcga
ttccagagacctcgcctcgagcaaatcaaaggaaaaataatgagcatctgctttaaggag
aaagtaaagatatcgcccgcaaaagtggaagaaatcatagcggctaccaacaacgatatt
cggcaatccattaaccacattgccctgctgagcgccaaggaagacgcttctaaaaagtca
gggcagcagattgccaccaaggatctgaagctgggaccctgggaagtggtccgaaaagtc
ttcacagcggacgagcacaagcacatgtcctttgccgacaagagcgaccttttctttcac
gactacagtctggccccgctctttgtgcagcaaaactatctgcaggtcctaccgcaggga
aacaaaaaggatgtcctggccaaggtggcagctacggcagatgccttaagcttgggtgac
cttgttgaaaagcgaattcgtgcgaattcagcttggagtcttcttcccactcaggcctta
ttcagctcggtccttcccggcgagcacatgtgtggccacttcactggacagattaacttt
cccgggtggctgggcaagaattccaagtctggaaaacgtgccaggctggctcaggagctg
catgatcacactagggtctgcacctcgggctcaagactatcggtgaggttggattacgcc
cccttccttctggataatatagtgcgacctctggcaaaggatggccaggagggtgtaccc
gctgctttagacgttatgaaggattaccatctactccgtgaggatctggactcgctggtc
gagcttacatcctggcccggcaagaaatccccactggacgcagtggatgggagagtaaaa
gccgctttaacgcgatcttacaacaaggaggttatggcatactcctattccgctcaagct
ggcatcaaaaaaaagaaatcggaggctgctggagcggatgacgattacttaggcgagagt
ccgggcgaagaggacggagatggtggccacatatcatcagaggaagacgaggacaaggac
aacctagagctggatggtttgatcaaagccaaaaaaaagacaacttcgtcaaaagcggct
ggtggatccaaaaaggctacaacttccacggcttcaaagtctaaggccaaggccaaaaag
tga
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