Drosophila sechellia: 6614110
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Entry
6614110 CDS
T01064
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
dse
Drosophila sechellia
Pathway
dse03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6614110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dse03021
]
6614110
Transcription machinery [BR:
dse03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
6614110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF3874
Motif
Other DBs
NCBI-GeneID:
6614110
NCBI-ProteinID:
XP_002038564
UniProt:
B4I4F8
LinkDB
All DBs
Position
3R:5223675..5225808
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AA seq
575 aa
AA seq
DB search
MSSASKSTSSAASGSSTSAAAAAAVSVASGSASSSANVQEFKIRVPKMPKKHHVMRFNAT
LNVDFAQWRNVKLERENNMKEFRGMEEDQPKFGAGSEYNRDQREEARRKKFGIIARKYRP
EAQPWILKVGGKTGKKFKGIREGGVGENAAFYVFTHAPDGAIEAYPLTEWYNFQPIQRYK
SLSAEEAEQEFGRRKKVMNYFSLMLRKRLRGDEEEEQDPEEAKLIKAATKKSKELKITDM
DEWIDSEDESDSEDEEDKKKKEQEDSDDGKAKGKGKKGADKKKKKRDVDDEAFEESDDGD
EEGREMDYDTSSSEDEPDPEAKVDKDMKGVAEEDALRKLLTSDEEEDDEKKSDESDKEDA
DGEKKKKEKGKDEASKDKKKKKPSKDDKKGKSNGSGDSSTDFSSDSTDSEDDLSNGPPKK
KVVAKDKEKEKEKESAASSKATTSSSNANKSRSATPTLSTDASKRKMNSLPSDLTASDTS
NSPTSTPAKRPKNEISTSLPTSFSGGKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKK
TPVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgcctcaaagtcgacgtcgagcgctgccagcgggagctccacgtccgcagct
gccgccgccgcagtctccgtcgcctcaggatccgcctcgtcctccgccaacgtgcaggag
ttcaagatccgcgtacccaagatgcccaaaaagcaccatgtgatgcggtttaatgccacg
ctcaatgtggatttcgcacagtggagaaatgtgaaactggagcgggagaacaacatgaag
gagttccggggcatggaggaggatcagcccaagttcggtgctggatcggagtacaatagg
gatcagcgcgaagaggctcgccgcaagaagtttggcattatagcgagaaagtaccgtccg
gaggcgcagccttggatccttaaagtgggtggcaagactggaaagaagttcaaaggcatc
cgcgagggtggcgtaggcgagaatgccgctttctatgtgttcacccatgcaccagacggc
gccattgaggcataccccttgaccgagtggtacaacttccagcctattcagcgctacaaa
tccctgtcggcggaggaggccgaacaggaatttggtcggcgcaaaaaggtgatgaactac
ttctctctcatgttgcgaaagcgtctgcgcggcgatgaggaagaggagcaggatccggag
gaggccaagctaattaaggcagccaccaaaaaatccaaggagctcaagatcactgacatg
gatgaatggattgattccgaggatgagtcggattcggaggacgaggaggataaaaagaag
aaggagcaggaagacagcgacgatggcaaggccaagggaaagggcaagaagggagcagac
aagaaaaagaaaaagagggatgttgatgacgaggccttcgaggagtcggacgatggcgac
gaggagggcagggaaatggactacgacaccagctccagtgaagacgaaccagatcccgag
gcaaaggtggacaaggacatgaaaggcgtggccgaggaagatgcgctccgcaagctactt
acctccgatgaagaggaggacgacgagaagaagtctgatgagtccgacaaggaggatgcc
gacggcgagaagaaaaagaaggagaagggcaaggacgaggcctccaaagacaaaaagaag
aagaaaccttcgaaggacgacaagaagggcaagtcgaacggcagcggtgactcgtccaca
gacttcagctctgacagcacagactccgaggacgacctcagcaacggaccgcccaagaag
aaggtcgtcgccaaggacaaggagaaggaaaaggagaaagagagcgctgcgagcagcaag
gccaccaccagcagcagcaatgccaataagtctcgctcggcaacgccaacgctctcgacg
gatgccagcaagcgcaagatgaacagcttgcccagcgatctcaccgcctccgacacaagc
aacagtcccaccagcacgccagcaaagaggcccaagaacgagattagcacatcgctgccc
acttccttctctggcggcaaagtagaggactacggcatcaccgaggaggcggtgcgtcgg
tatctcaagcgcaagcccctgactgccaccgagttgctcaccaagttcaagaacaagaag
acgcccgtctccagcgaccgtttggtcgagaccatgacgaaaatcctgaagaagatcaat
cccgtcaagcacaccatacaggggaaaatgtatctctggatcaagtag
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