Drosophila sechellia: 6615318
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Entry
6615318 CDS
T01064
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dse03021
]
6615318
03041 Spliceosome [BR:
dse03041
]
6615318
Transcription machinery [BR:
dse03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
6615318
Spliceosome [BR:
dse03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
6615318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
6615318
NCBI-ProteinID:
XP_002039719
UniProt:
B4I7K9
LinkDB
All DBs
Position
2R:complement(17197194..17204154)
Genome browser
AA seq
1305 aa
AA seq
DB search
METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKV
PGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN
NVFKSEVIQPIFDLADPNHPIYHQMPPVGGSGGQGVGVGPGPSSSGALSLADISSGPNGL
NSSGMEISMNSSVGDDKMGGAMPDLSLGHEKFGGGSSSSKRHYSEQHYSKRQSVVSCSSK
TSKSHHHKREYVKSSHDIEYQVREIIEEEDDGLQMLMADDHHCMGDDSPPTSSNLLDEKK
IKQLLNNPNVLRQLHTLQNFQNLKPQEENQKHRYQDEALQQHFQNVMKGNAGMPPGMGMG
MGMGMNMNDSMDLNKDVEFISEQQTIEVINLDGGDSRSPTPDRDRYKRSRRNSRSRTRSP
RGRGAGGGTGNDRRRRGSRSRSRSRSPRSSRRRGSRDRDRMDRSNRDKERDREHERERRK
KGLPDIKKEHLSVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNR
RQDAHKAMQALKNHKLQGRAITISWAAGKGVKSKEWKDYWDLELGVTYIPWSKLSSDTDF
DALEEGGMFDEDTMPIQMKQKINQAKNAAKEHKGASIAEAAGAPSVGVPPPNLIFGIDTT
QPPPVGPVGPVGPPPGPGAPPPGLMGMVRGQFPMAPPMGINMPPPIMMPPTNMPPPMMMP
TTNMPPPMMMPTMIPPGFPGIGGPPHPMGLPPGAPFPPPGAVPPPIPTGGQMSNSGNVSD
DQMDIEMDVEDAPPLPPQQANFNPSPSNVDLSPAAMANEMFQQRDRERDRDNRDRSRGPG
NSRWGGRDDVVEAAERWRAENGGGPGSGLGPNAAFNEARARLNLNPIEHGMPRPDFMDFD
NRGGPGGPRGMGPRGNHNGGPGGDFFPPNMNHNRFNQPTSLMQMRIPPPASFNQRMGGPA
GNGGNGVGPMFMRNQGGGPGGGGPSGGGPGGGGPGGGGPGGRQQGPGFFNPRNPFNDNQR
GRGGQGGGGGRGVGGGGGGGGPGGRGRWSDDEDEGGNNFKRRGGPGGPGGNRFRGERGGE
MMDDRRGNNSRGGRGGPREDRERPGFGNRRGSRDDSNRHSISSTDEGNKTASETEPKPKN
VETELGSTNTGAPAAGTRVDTEEDWDQELQDYEARMEAQKPGERASQSANSPQQEKQPEE
NQNFAKPADVTGDPLVAKSQTETSAACTPLYDELPPPAVPQTPTQPPKEPQGSPPRPAPQ
VIETEAAPHEESVPAPAAELQTEAPSAEEPQAPAASADVEAEADP
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgttgttgccttcaacaatgagctctccggactctatgacagccgaccgccc
atttccaaggcgaagatggccgccatcaccaagtcggcgatgcgggccatcaagctgtat
aagcacgtcgtccagagtgtggagaagttcatcttgaagtgcaagccggagtacaaagta
cccgggctgtatgtaatcgactcgatagtgcgccaatcgcgccaccagtacggcatggac
aaggatctgttcgcgccccgattccagcgcaatctcacggagacctttgccaacctgttc
cggtgcgctccggaggacaagagccgcattatccgcgtgctgaacctgtggcaaaaaaac
aacgtcttcaagtccgaggtcatccagccgatctttgacctagccgacccgaaccacccc
atctaccatcagatgcctccggtgggtggcagtggaggacagggcgtcggcgtgggtcca
ggacccagcagcagcggagctcttagcctggcggacatatcgagcggtccgaacggtctg
aacagctccggaatggaaataagcatgaacagctccgtgggcgacgataaaatgggcggt
gccatgcccgacttgtcgctgggccatgagaagttcggtggtggcagcagcagctccaag
cgtcactactcggagcaacactactccaaacgccagtcggtggtctcgtgctcgtccaag
accagcaagtcacatcatcacaaacgggaatatgtcaagagctcgcacgacattgaatac
caggtgcgggagatcatcgaggaagaagatgacggcctgcagatgctgatggcagatgat
caccactgcatgggcgacgactcaccgcccacttcttcaaacctgttagacgagaagaag
atcaagcagctgctaaacaatcccaatgtgctgcggcagctccatacgctgcagaacttc
caaaacttgaagccgcaggaggagaaccagaagcatcgctatcaggacgaggcactgcag
cagcatttccagaacgtaatgaagggaaatgctggtatgccgccgggcatgggaatgggc
atgggcatgggcatgaacatgaacgacagcatggacctcaacaaggatgtcgagttcata
tcggagcaacagaccatagaggtgatcaatctggatggtggcgattcccgcagcccgacg
cccgaccgtgatcgctacaagcgcagtcgccggaacagtcgcagccgcacgagatctccg
cgaggacgtggcgccggtggaggcacgggcaatgatcgacgtcggcgtggctctcgttcc
cgatcgcgcagccgatctccacgctctagccggcgacgcggatcaagggaccgagatcgc
atggatcgtagcaaccgggacaaggagcgcgatcgcgagcacgagcgtgagcggcgcaag
aagggattgccggacatcaaaaaggaacatctcagtgtatgcagcactacgctgtgggtg
ggccacctgtctaagcttgtttaccaggaggagctgtccgatacctttggcgagtatggc
gacatagtgagcatcgatcagattgtgccgcgtggatgcgcttttattgtaatgaaccga
cgccaggacgcccacaaggcgatgcaagctctaaagaaccacaagctgcagggacgcgcc
atcacgatttcatgggccgccggcaagggtgtgaaaagcaaggagtggaaggactactgg
gacctcgaactgggtgtaacttacattccttggtccaaactcagttcggatacggacttc
gacgccctggaggagggtggtatgttcgacgaagacactatgcccatccaaatgaagcag
aagatcaaccaggccaagaatgctgccaaggagcataagggtgcatccattgcggaggca
gctggtgcgccaagtgtgggtgttccaccgccaaatctgatatttggcatcgatacaacc
caaccaccaccggttggtccagtcggcccagtgggtcctccacctggtccgggagcccca
ccgcctgggctcatgggtatggttaggggacaatttccgatggccccacccatgggcatt
aatatgccaccgcccataatgatgccgccaacaaacatgccgccaccgatgatgatgcca
acgaccaacatgcctcctccaatgatgatgccgacaatgattcctcctggctttccaggc
attgggggaccaccacatcctatgggcttgccaccaggagctccgtttcctccgcctgga
gctgtgccgccacccattcccaccggtgggcagatgagcaatagtggcaacgtgagcgat
gatcaaatggacattgaaatggacgtggaggacgccccacctctgccgccgcagcaagcc
aactttaatccgtcccccagcaatgtggacctatcgccggcggccatggccaacgagatg
ttccagcagcgggacagggagcgcgatcgagataatagggatcgctcccggggaccgggc
aactcgcgctggggcggtcgagatgatgtcgttgaagcggcagaacgctggcgcgccgaa
aatggtggtggtccgggatctggactcggaccgaacgcagcctttaacgaggcacgtgcg
cgcctgaacctaaatcccattgagcacgggatgccgagaccggacttcatggattttgat
aatcgcggtggaccgggtggaccacgaggaatgggaccgcgtggaaaccacaacggtggc
cccggaggcgactttttcccgcccaacatgaatcacaatcggttcaatcagcccactagc
ttgatgcagatgcgcatcccgccgccggcctctttcaaccagcgcatgggtggtccagct
ggtaacggtggcaacggcgttgggcccatgtttatgcgcaaccaaggaggtggaccaggt
ggtggtggacccagcggtggtggacccggcggtggtggacccggcggcggtggcccgggc
ggacgtcagcagggaccaggtttctttaatcctcggaaccccttcaatgacaaccaacga
ggacgtggaggtcaaggtggaggcggaggtcgcggcgtgggcggaggaggaggaggtggc
ggtcctggaggtcgcggacgttggagcgacgatgaggacgagggcggaaacaacttcaag
cggcgtggcggtcccggtggaccaggcggtaatagattccgtggcgagcgtggaggcgaa
atgatggacgaccgtcgcggcaacaattcacggggtggacgcggagggccgcgagaggat
cgcgaacgtccgggcttcggaaacagacggggctcgcgagatgacagcaaccgccattca
ataagttcgacggatgaaggcaacaagacggcttcggagacggaacccaagcccaaaaac
gttgaaaccgaattaggtagcaccaacaccggtgcgccagctgcgggaactagagtggac
accgaggaggattgggatcaggagcttcaagactatgaggcgagaatggaggcccaaaag
ccaggcgaacgagcatctcagtctgccaacagtccgcagcaggaaaagcagccggaggag
aatcaaaacttcgcaaagccagccgacgtcaccggcgatcctttggttgcgaaatcacaa
acagaaacttcagccgcctgcacgcccctttatgacgagctgccaccgccagcagttcca
cagacaccaactcagcccccgaaagaacctcaaggttctccgccccggccggcgccgcaa
gtcattgaaaccgaggctgcgccccatgaggaatcggttccagcgccggctgctgaactc
caaacggaggctccatccgcggaggaaccccaagccccagctgcttccgccgatgtcgaa
gccgaagctgatccctag
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