Drosophila sechellia: 6615322
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Entry
6615322 CDS
T01064
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dse
Drosophila sechellia
Pathway
dse03022
Basal transcription factors
dse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6615322
09124 Replication and repair
03420 Nucleotide excision repair
6615322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dse03021
]
6615322
03036 Chromosome and associated proteins [BR:
dse03036
]
6615322
03400 DNA repair and recombination proteins [BR:
dse03400
]
6615322
Enzymes [BR:
dse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
6615322
Transcription machinery [BR:
dse03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
6615322
Chromosome and associated proteins [BR:
dse03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
6615322
DNA repair and recombination proteins [BR:
dse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
6615322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
DEAD
ResIII
nSTAND3
AAA_11
ALKL1_2
Motif
Other DBs
NCBI-GeneID:
6615322
NCBI-ProteinID:
XP_002039723
UniProt:
B4I7L3
LinkDB
All DBs
Position
2R:17206626..17210157
Genome browser
AA seq
769 aa
AA seq
DB search
MKLSVDGLLVYFPYEYIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYM
VEHPETVRKLIYCSRTVPEIEKVIAELQNLMVYYERHCPNPPPFTGLVLSSRKNMCIHPE
VSKEREGKAVDGKCYGLTASYIRERHDMDAETPICQYFEGFSLEGKESTLPVGVYSIDDL
KEYGRSRNWCPYFLARYAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNID
NVCIDSMSVKINRRTVERSTNALNHLTKLVQDIREEDTNRLNEEYQRMVQGLKDASVQRD
TDMILANPVLPNDVLTEVVPGNIRNADHFLSFLRRFIEYIKTRLRVHHVVQESPAGFLKD
ISSKICIERKPLRFCAERLSSLLRTLEINDLTEFGALTLITHFATLVSTYTKGFTIIIEP
FDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMYPKILDFDPVVMSS
FTMTLTRPCLLPMIVSKGNDQVTISSKFETREDTAVIRNYGQLLVEVAKTVPDGIVCFFT
SYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYVKACDCGRGAVLLAVA
RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA
AQCVGRALRGKTDYGIMIFADKRFSRHDKRSRLPKWIQEHLVDSFCNLSTEEAVQLARRW
LRRMAQPFTREDQLGISLLTLAQLENMEQEKLERQAQGKQGVGGEVQEL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcagcgtggacggcctgctggtgtactttccgtacgagtacatctacccggaa
caatatgcctacatgctggaacttaagcgcagcctggacgccaagggccactgcctgttg
gaaatgccctcgggaacgggcaagacggccacgctgctctccctgatcgtggcctacatg
gtggagcatccggagacggtgcgcaagctcatctactgctcgcgtactgttccggagatc
gagaaggtgatcgcggagctgcagaacctaatggtttactacgagcgccactgccctaat
ccaccacccttcaccggtctggtgctcagctcaaggaagaacatgtgcatccatccggag
gtcagcaaggagcgcgagggcaaggccgtggacggcaaatgttacggactcaccgccagc
tacattcgcgaacggcacgatatggacgccgagacgcccatctgccagtactttgaggga
tttagcctggagggtaaggagtccacattgccggtcggcgtctacagcatcgatgacctc
aaggaatacggtcgatcgcgcaactggtgtccctacttcttagctcgctatgctattgcc
catgctcacattgtggtatacagttaccactacctattggatccgaagattgcccaggtg
gtatcgaaggagatgagccgcgagtcctgtgtggtttttgatgaggcgcacaacatcgac
aacgtttgcatcgattcgatgagtgtgaagatcaacagacgcaccgtggagcgaagcacg
aatgctttgaaccatctaactaaactggttcaggacattcgcgaagaggacacaaatcgc
ctgaacgaggagtatcagcgcatggttcagggcctgaaggatgccagtgtgcagcgcgac
acggacatgatcctggccaatccggtcctgccaaacgatgtcctaaccgaggtggtgccc
ggaaacattagaaacgccgaccatttccttagctttctgcgtcgattcatcgagtatatc
aagacgagattgcgcgttcatcatgtcgttcaggagtcgcctgcgggcttccttaaagat
atttcctccaagatttgtatagagcgaaagcctctgcgtttttgcgctgagcgcctgtcc
agtcttctgcgcacgcttgagatcaatgatttgacggaatttggagcccttactctgatt
acacacttcgccaccctggtgtccacctacacaaagggcttcacaatcattatagaaccc
ttcgacgataaaacgccgactgtttcgaatcccattttgcactttagttgcctagactct
tccattgccatggctccggtattttcgagatttcaaaccgtggtcattacttcgggaacg
ttgtcacccatggacatgtacccgaagatactcgatttcgatccagtggtcatgagcagc
tttaccatgacgctgacccgtccatgtctccttcctatgattgtatcgaagggcaacgac
caggtcaccatttcgtccaagttcgagacgcgagaagacaccgctgtcatccgaaactat
ggccagctgttggtggaggtggcaaagacagtgcccgacggtattgtatgcttcttcacc
tcctatttgtacttggagtctgtggtggcctcctggtatgatcagggaatcgtcgacacc
ctgcttcgctacaagcttctattcattgagactcaggacaatgccgagaccagctacgcc
ctgatgaactatgttaaggcctgcgattgtggtcgtggagcagtgctgttggctgtggcg
cgtggcaaggtctccgagggtgtggatttcgaccatcattatggtcgcgcggtgctcatg
ttcggcatcccctacgtgtacacgcagtcgcggattctcaaggcccgattggactacctg
cgggatcagtttcagatacgtgagaacgacttcctgaccttcgacgccatgcgtcatgcg
gcccagtgcgtgggccgtgcgctgcgcggcaagacggactacggcatcatgatcttcgcg
gacaagcgcttctcgcgccacgacaagaggtcgcgtctgcccaagtggatccaagagcac
ctggtggacagtttctgcaacctgagcacggaggaggccgtgcagctggcccgtcgttgg
ctgcggcgcatggcgcaaccgttcacacgggaggaccagctgggcatctcactgctgacc
ctcgcccagctggagaacatggagcaggagaagcttgagcggcaggcccagggcaagcag
ggcgttggcggcgaggtgcaggagctgtga
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integrated database retrieval system
