KEGG   Drosophila sechellia: 6615737
Entry
6615737           CDS       T01064                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
dse  Drosophila sechellia
Pathway
dse03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dse00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    6615737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dse03019]
    6615737
Messenger RNA biogenesis [BR:dse03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     6615737
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     6615737
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2
Other DBs
NCBI-GeneID: 6615737
NCBI-ProteinID: XP_002040108
UniProt: B4I8P8
LinkDB
Position
2R:complement(19548667..19549862)
AA seq 298 aa
MSTNAAIDLALDRVDWRDLAAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDENIKSSVA
GVIQKVNKLISVRPLKSRYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPG
GELRRRSAEDEQMMRRYLDEGDLISAEVQNIFEEGSLSLYTRSLKYGKLSQGILVKVFPA
LVKRRKMHFHNLLCGASVILGNNGYIWISPTKGQEEEGGEGGFAQNLNEHVPRGEREVIA
RLRNSILALAKCKLMIYDTSIQYAYEESLRYEAHELLQQNAIYDIGQQTQARLRDTDE
NT seq 897 nt   +upstreamnt  +downstreamnt
atgtccaccaacgcggcgatagatctggccctggaccgggtggactggcgcgacctggcc
gcgcagacggaggaacagccgagggtgtatacgccgggcgaagtactgatgccggaggcg
ggattcatgcgtggccacggaaccttcgtcgaggacgagaacatcaagtcttcggtggcc
ggggtgatccagaaggtcaacaagctgatctcggtgcgcccgctcaagagtcgctatgtg
ggcgagatcggggacgtggtggtggcccgcgtcagcgaggtgcaacagaagcgctggcga
gtggacaccaattcccggcttgactccatcctcctgctctcctctgtgaatctgccgggc
ggagaactccggcggagatcggcggaggacgagcagatgatgcgacggtacttggacgag
ggcgatctcatctccgccgaagtccagaacatcttcgaggagggctccctttcgctgtac
acgcgcagcttgaagtacggaaagctgtcgcagggcatcctggtcaaggtgttccccgct
ctcgtcaagcgccgcaagatgcacttccacaacctgctctgcggcgcctccgtgatcctg
ggcaacaatggctacatctggatatcgccgaccaagggccaggaagaggagggcggcgag
ggaggattcgcccagaacctgaacgagcatgtgccgcgcggggagcgggaggtgattgcc
cggctgaggaactccatcctcgcgctggccaagtgcaagctgatgatctacgacaccagc
atccagtacgcctacgaggagtccctgcgctacgaggcccacgagctgctccagcagaac
gccatctacgacatcggccagcagacgcaggctcggctgagggacacggacgagtag

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