Drosophila sechellia: 6616405
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Entry
6616405 CDS
T01064
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
dse
Drosophila sechellia
Pathway
dse04120
Ubiquitin mediated proteolysis
dse04137
Mitophagy - animal
dse04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
6616405
04120 Ubiquitin mediated proteolysis
6616405
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
6616405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dse04131
]
6616405
04121 Ubiquitin system [BR:
dse04121
]
6616405
03029 Mitochondrial biogenesis [BR:
dse03029
]
6616405
Enzymes [BR:
dse01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
6616405
Membrane trafficking [BR:
dse04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
6616405
Aggrephagy
Other aggrephagy associated proteins
6616405
Xenophagy
Other xenophagy associated proteins
6616405
Ubiquitin system [BR:
dse04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
6616405
Mitochondrial biogenesis [BR:
dse03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
6616405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Dsc3_N
Rad60-SLD_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
6616405
NCBI-ProteinID:
XP_002040765
UniProt:
B4IAK5
LinkDB
All DBs
Position
3L:complement(20675482..20678351)
Genome browser
AA seq
482 aa
AA seq
DB search
MSFIFKFIATFVRKMLELLQFGGKTLTHTLSIYVKTNTGKTLTVNLEPQWDIKNVKELVA
PQLGLQPDDLKIIFAGKELSDATTIEQCDLGQQSVLHAIRLRPPVQRQKIQSATLEEEEP
SLSEEASKPLNETLLDLQLESEERLNITDEERVRAKAHFFVHCSQCEKLCNGKLRVRCTL
CKGGAFTVHRDPECWDDVLKSRRIPGHCESLEVACVDNAAGDPPFAEFFFKCAEHVSGGE
KDFAAPLNLIKNNIKNVPCLACTDVSDTVLVFPCASQHVTCIDCFRHYCRSRLGERQFMP
HPDFGYTLPCPAGCEHSFIEEIHHFKLLTRDEYDRYQRFATEEYVLQAGGVLCPQPGCGM
GLLVEPDCRKVTCQNGCGYVFCRNCLQGYHIGECLPEGTGASATNSCEYTVDPNRAAEAR
WDEASNVTIKVSTKPCPKCRTPTERDGGCMHMVCTRAGCGFEWCWVCQTEWTRDCMGAHW
FG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatttttaaatttattgccacttttgtacgcaaaatgctggagctgttgcaa
tttggagggaaaacccttacgcacacgctgagtatttatgtaaaaacgaacacaggcaaa
acgctgaccgttaatctggagccccagtgggatattaagaacgtaaaggaactggtggcc
ccacaactgggacttcagccggatgatctaaagatcatatttgccggtaaggaactaagc
gatgccacgactatagagcaatgtgacttgggacagcaaagcgttttgcatgccattcgt
ttgcgaccgcccgtgcagcgccagaaaatccagtcggccactttggaggaggaggaacct
tcgctgagtgaagaagcctccaagcctctaaatgaaactctgttggacttgcagctggaa
agcgaggagcgtctgaatataaccgatgaagaaagagtccgtgccaaagcgcatttcttt
gtgcattgcagccaatgcgaaaagctgtgtaatggcaaacttcgggtgcgctgcactcta
tgcaagggcggcgcctttactgtccatcgtgatccggagtgttgggatgatgtcttgaag
tcgcgtagaattcccggtcattgcgaaagtctggaggtggcctgcgtggacaacgctgct
ggcgatccgcccttcgctgaattcttcttcaagtgtgctgagcatgtctccggcggggag
aaagattttgcagctcccttgaacctaatcaagaataacatcaagaatgtgccttgcctg
gcctgcacggatgtgagtgataccgttttggttttcccctgcgcatcgcagcacgtcacc
tgcatcgactgcttccgccattattgccgttcccgtttgggcgagcgtcagtttatgccg
catccggactttggctacaccttgccctgtcccgcaggctgcgagcactcgttcatcgag
gagattcatcacttcaagctgctgacacgcgacgagtacgatcggtaccagagattcgcc
accgaggaatatgtccttcaggcaggtggagtactctgcccccagccaggctgcggcatg
ggccttttggtggagcccgattgtcgcaaggtgacctgtcagaacggctgtggctacgtg
ttctgccgcaattgtttgcagggctaccatatcggggagtgtctgcccgagggaacgggc
gccagtgccacaaactcctgcgagtacaccgtggaccccaatcgagctgccgaggcgcga
tgggatgaggccagcaatgtcaccatcaaagtcagcaccaagccctgtccaaaatgcaga
acccccacggagcgagatggcggctgcatgcacatggtctgcacacgcgctggctgcgga
ttcgagtggtgctgggtctgccagactgagtggacacgtgactgcatgggagcccactgg
ttcggctag
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