Drosophila sechellia: 6616473
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Entry
6616473 CDS
T01064
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dse03400
]
6616473
DNA repair and recombination proteins [BR:
dse03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
6616473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
MTR4-like_stalk
Seryl_tRNA_N
RNA_helicase
AAA
AAA_22
AAA_27
Motif
Other DBs
NCBI-GeneID:
6616473
NCBI-ProteinID:
XP_002040834
UniProt:
B4IAS4
LinkDB
All DBs
Position
3L:21017221..21021772
Genome browser
AA seq
1034 aa
AA seq
DB search
MAGDRALSSKQLAGRIHSVYCKDFVSYSEITFHPKHYLNVLTGPNGSGKSTIVSAIILGL
GGEPILLDRSASVADYIQSNKSSATIIVRVYGRTPNTTETFRRIINSKGSSTFSVNDKDT
SKKNFLAAVSSFNIQVSNLCQFLPQDRVQDFSKMNPQELLLNTMSSVCDDELTNSFNRLK
QMRTEQANVHANREKEKSDLVKKQKRLEHLQMTVAQYKEREDVKQKLQVYSAKKLWVETQ
AGEAKAAEMKTQVKNAKTHSDKLKHQHDKFVQAQQQIENEKVSLREAFLEKTRLLERAVA
QKAAIDGKMDSLKQGIYQKKYELEQNIKKSQKTATECDNLKQLVENKIYELETLNKSRPQ
IVSELERAKESCAAARGKAMEQYSRRRQLEQKLNDEMIPEITAYKLKIERLRNVKMQKIN
EIRAKNPNLVVAMNWLAQNKQRYKSNVYDPMILELTVQNHEDAKYLENVVAQRDLFAFAC
EDKGDMSDLINELCVKQKLGVNVIYCASSDRLAHSPKIPIEDLRSFGFRSYLVDLVTGPI
PLINKLCASYSIHNIPIGTEAVGNYTSSIPKAIRVYFGGSKKFVVTASRYRSDTILTESS
IRAKNQLITVDSQQLALVMKQCSEAVKESDSIKNAITQTDNEFERLQAVAHDEQEKRRKL
DQKIAHFNSLKIEIETLQKKLEALRNSDSLDCLQTNFCNSLHKDLKKVIDADAELCSCLK
AVERLINEKNAAQTKVSIYMLQHESQIEALKESEEQSKAATRDFQQLLQGLENQISDVNK
RKSAIQGLCDGEIPTSSKFPFKKEFMELENIDLPELREAIHDFQARLECMKSVNSEAISS
YQQLQNEVKELEEGIQESVNQAKSIESGMSNLYDKWEPKLNSLVETISTKFSEFMESIEY
VGEVVLSKTDKYDFDSYGIQIMVQFRRGLQLQPLDKFIQSGGERAVSIAIYSLSLQHVTH
VPFRCVDEINQGMDATNERHIFDLLLKEATKHGSAQYLFVTPKLLRDLNYNEHLCVSIVH
NSKTVCHGMQFPMT
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggatcgtgccttgagttccaagcaattggcggggcgcatacactccgtgtac
tgcaaagatttcgtatcctacagcgagatcacattccatccgaagcactacctaaacgtc
ctgaccggtcccaatggcagtggcaagtccaccatcgtgtcggccatcattttgggcctg
ggaggggaaccgattctccttgatcgctccgccagcgttgccgactacatacagagcaac
aaatcctcggccaccataattgtccgtgtgtatggacgcacgcccaacaccacggagacc
tttcggcgcataataaactcaaagggctcgtctaccttctctgtgaacgacaaggacacc
tccaagaaaaactttctggccgccgtatcatcctttaacatacaagtcagcaatttgtgt
cagttcctcccgcaggatcgggttcaggacttctccaagatgaatcctcaagaacttttg
ctcaacacaatgtcctccgtgtgtgacgatgagctgaccaacagcttcaatcgtctaaag
caaatgcgcacagaacaggcgaatgtccatgctaatcgggaaaaagagaaaagtgatctg
gttaagaagcaaaaacgattggaacacttacaaatgactgtggcccagtataaagaacgc
gaagatgtcaagcaaaagctgcaagtatacagtgcgaagaaattgtgggttgagactcag
gctggagaagccaaagccgcagaaatgaaaactcaagtgaaaaacgcaaaaactcacagc
gacaaattgaagcaccaacatgacaaatttgttcaagcccaacaacaaattgagaacgaa
aaagtgtcactcagagaggccttcttggaaaagacacgcttattagaaagagctgtagcg
cagaaggcggcaattgatggtaaaatggactctttgaagcaaggaatttaccaaaaaaaa
tatgaactggagcaaaacattaaaaaatcacaaaaaacggccacagagtgtgataaccta
aagcagttggtggaaaataaaatttacgagcttgaaaccctaaataagagcaggcctcag
atcgtttcggaacttgaaagggccaaggaatcgtgcgcagcggcccgcgggaaagcaatg
gagcagtacagcagacggagacaactggagcaaaaactgaatgatgaaatgattcctgaa
attactgcgtataaacttaaaatagagcggttgagaaacgtcaaaatgcaaaagattaat
gaaataagagcgaaaaatccgaatttggttgtggccatgaactggttggctcaaaataag
caaaggtacaaatcgaacgtttatgacccaatgatacttgagcttacagtacaaaatcat
gaggatgcaaagtatctggaaaacgttgtggcgcagcgagatttatttgcatttgcgtgt
gaggacaagggggatatgtcggatctgatcaacgagttgtgtgtgaagcaaaaattggga
gtcaacgttatatactgcgcatcatccgatagactcgcgcacagtcccaaaattccgatc
gaagatctgcgctctttcggatttcggtcatacctcgtggatcttgttacgggaccaata
ccactaataaacaagctgtgcgcttcctactccattcataatataccaattggaacagaa
gctgtgggcaattacacttcatccattccaaaagctatccgagtttatttcggcggcagc
aagaagttcgttgtgaccgcatcccgctatcggtcggacactattctcactgaaagtagc
attcgagcgaagaaccaacttattacagtggactcacaacaactggccctggtgatgaaa
cagtgctccgaagcagtgaaagaaagcgacagcattaaaaacgcaataacccagaccgac
aatgaatttgaacgattgcaagctgttgcacacgatgagcaagagaagagacgaaagctt
gaccaaaaaatagcccattttaatagcttgaaaatcgaaattgaaacgctccagaagaag
ctggaagccctgcgcaatagcgattcgctagactgtcttcaaaccaatttttgtaatagt
ttgcataaagacttgaaaaaagtaatcgatgctgatgcggagttgtgctcctgcttgaaa
gctgtagaacgacttataaatgaaaagaatgcggcccaaacaaaggtatccatttatatg
ctgcaacatgagagtcaaattgaagccctcaaggaaagcgaggaacagagtaaagcagca
accagagactttcaacagttgctgcaaggcttagaaaatcaaattagcgacgttaacaaa
cgaaagagcgctatccagggcctgtgtgacggagaaattccaaccagtagcaaatttcct
tttaagaaggaatttatggagctggaaaatatagatttgcccgaactacgagaggcaatt
catgactttcaggcacgattggagtgtatgaaaagtgtaaactccgaggccatcagcagc
tatcaacaactgcaaaatgaagtcaaagaactggaggaaggaattcaagaatctgttaac
caagcaaagagcatcgagtctggcatgtccaatttatacgataaatgggagcccaaactt
aatagcttggtagaaacaatcagtaccaagttcagcgaatttatggagtccattgaatac
gtgggagaagttgtgttatccaaaaccgacaaatatgactttgactcatatggaattcag
ataatggtccagttccggagaggtctccagttgcagccgctggacaagtttattcaatct
ggtggcgaacgcgcagtctccatcgccatatactcattgtccttgcaacatgtcactcat
gtgccattcaggtgtgtcgacgaaataaatcaaggcatggacgctacaaatgaacgtcac
atattcgacttgctcctcaaagaagccaccaagcatggctcggctcagtatttatttgta
acacctaagttgcttcgagacctgaactacaacgaacatctctgtgtttccattgttcac
aactcaaaaactgtttgccatggcatgcaattcccgatgacttag
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