Drosophila sechellia: 6616960
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Entry
6616960 CDS
T01064
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dse04131
]
6616960
Membrane trafficking [BR:
dse04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
6616960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
hEGF
EGF_3
Protocadherin
DUF3105
DUF4690
Motif
Other DBs
NCBI-GeneID:
6616960
NCBI-ProteinID:
XP_032578127
LinkDB
All DBs
Position
3R:complement(24242427..24282947)
Genome browser
AA seq
1066 aa
AA seq
DB search
MATTCMPHFTEYFQTTTQSELPTNESANSSSGSSGSSSGCREPSKTSGFFYSASTHYQSK
VQQLISFSFTSSFHLLFITCILSISKFCNAAAVNAAHVTAATPTPSEIMHNLSGAALLER
LKASTLGPTLDQLKHLAPAAANSISPGTGSGMGIGMGSFGSSINSVLNGNPLKFLNVSGK
IGTPLDISLGLSNYCEEKQFQCSTGQCIPIRFVCDGSSDCPDHSDERLEECKFTESTCSR
DHFRCGNGKCIPQRWVCDQENDCADGTDESTSLCRSQTCSPEEFACKSGEGECIPLSWMC
DQNKDCRDGSDEAQCNRTCRSDEFTCGNGRCIQNRFECDDDDDCGDGSDEKNCREKPKCG
SDSFDCKNGQCISNLWVCDGDFDCRNGEDEMQNCTVSLLNFCQAGEFQCSDKISCLQKSW
VCDGEADCPDGEDESQSNCVKVSCRPDQFQCNDHSCIAGHLTCNGKGDCADGSDEIMCAI
SATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQC
VNLEVGYRCECQDGYKLDADQHTCVDIDECETPGICSQVCVNEIGSFKCECEAGYMRLLK
NHTRCKASEGHASLLLSRRHDIRKIALDRPEMTSIVNSTKAATALDFVFRTGMIFWSDVA
TQSIYKAPIDEGNDRTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKV
LIKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTAIITYDVKWPNGITLDL
VQKRLYWVDGKLNTILSSNYDGSQRQQVLYSSEYLRHPFSITTFEDYVYWTDWGKQAVFK
ANKFNGMYVEPVTATHMLEHPMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRINERS
PRISCACPTGLKLMPDGLMCVEDLRIPTVRPTAPMHRTIEQSSNSTTKRPQDGYSEKPVG
TKTESNRTDTTNQVHKSDAKSENDYVGIALNVIASLAGTALVASVIFVVYRRCTRAVNSM
NFENPVYHKTTEDHFSLEKNVTPHMFATAPDEEANNPLFQPGTECV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggccacaacctgcatgccgcatttcacggaatattttcaaaccaccacccagtcagag
ttaccaacaaatgaaagtgccaacagcagcagcggcagcagcggcagcagcagtggctgt
agagaaccgtccaaaaccagtggcttcttctacagcgccagcacacactaccagagcaaa
gtgcagcagctgatcagcttcagcttcacctcatcgttccacctgctcttcatcacctgc
atactgagcatcagcaaattctgcaatgcggcagcggtaaatgccgcccatgtgaccgct
gccacgcccactcccagcgagataatgcacaatctgagcggagcggcgctgctggagcgt
ctgaaagccagtactctgggacccaccctcgatcagctgaagcatctggctcctgcggca
gccaacagcattagtccaggtacaggatctggtatgggaatcgggatgggcagctttggc
agctccattaactcggtgctaaacggaaatcctctaaagttcctgaatgtgtcgggcaaa
atcggcactcctttggacatatcgctcggtctgagcaactactgcgaggagaagcagttc
cagtgctccactggccaatgtatccccatacggttcgtgtgcgatggctcctcggattgc
ccggaccacagtgatgagcggctggaggagtgcaagtttacagaatcaacttgcagccgg
gaccacttccgctgtggcaacggaaagtgcattccgcaaagatgggtctgcgatcaggag
aacgactgcgccgatggaaccgacgaatcgacgtccctgtgccgaagccaaacgtgttcg
cccgaggagtttgcttgcaagtcgggcgagggcgagtgcattcccttgtcctggatgtgc
gatcagaacaaagattgtcgcgatggaagcgatgaggcgcagtgcaataggacatgtcgc
tccgacgagttcacttgcggcaatggacgttgcatccagaatcgcttcgagtgcgacgat
gacgacgattgtggtgacggatcggatgagaagaactgtagggaaaagccgaaatgcgga
tcggactccttcgattgcaaaaatggacagtgcatttccaatctatgggtttgcgatgga
gattttgactgcagaaatggggaagatgagatgcaaaactgcaccgtcagtctattgaac
ttctgccaagcgggagagttccagtgctcggataaaatatcctgcctgcaaaaatcgtgg
gtttgcgatggcgaggcagattgtcccgatggcgaggacgagtcgcagtccaactgcgta
aaagtgtcctgtcgtccggatcagttccaatgcaacgatcacagctgcattgccggccat
ctgacctgcaacgggaagggggactgtgcggatggcagtgatgaaattatgtgcgccatc
agtgcgacgccaaggacttgcaatgccaccactgagttcgactgcggcggcggtctttgc
atcccgaatgccaaggtctgcaaccgcaggaaggactgcccgaatggcgaggatgagccg
gccggaaagtgtggcatcaacgagtgttcctcaaagaatggcggctgtatgcaccagtgt
gtgaatctggaggtgggttaccgctgcgagtgccaagatggctacaaactggacgccgat
caacatacatgtgtggacatcgatgagtgcgagactcccggcatttgctcccaggtgtgc
gttaacgagattggatccttcaagtgcgagtgcgaggcgggctacatgagactcctgaag
aatcacaccaggtgtaaggccagcgaaggacatgcctcgctacttctgtccaggcgccat
gatatccgaaagattgcactggatcgaccggaaatgacgtccatagtgaatagtacaaag
gcagccacggccctggacttcgtgttccgcacgggtatgatcttctggagcgatgtggcc
acccagagtatctacaaggcgcccattgatgagggtaacgatagaacggtggtgctgaca
aagtcctcggtgacctcggatggcctggctgtcgattggatctataaccatgtctacttt
acggacactcataagtgcaccatcgaactgactaacttcgagggtagcatgggcaaggtc
ctgataaaggactcccttgacattcctcgttccattgctttggatcccatcgagggctgg
atgtactggtccgactggggtgcttctccgcgtatcgaaagggcgggtatggatggctcc
caccgcactgccatcatcacctacgacgttaagtggccaaatggcatcacattggacctg
gttcaaaaacgcctatactgggtggatggcaagttgaacaccatcttgtcgtcgaactac
gatggctcgcaaagacagcaggttctctactccagcgagtacctgcgacatcccttctcg
atcaccaccttcgaggactacgtctactggaccgactggggcaaacaggccgtcttcaag
gccaacaagttcaatggaatgtatgtggagcccgtcacggcgacgcatatgttggaacac
cccatggtggtgcacgtgtaccatccgtatcgccaaccggatggcgtgaatcactgccag
tcggtgaatggccactgctcccatctctgcctgccagctcccaggattaacgagcggagt
cctcgcatatcctgcgcctgtccgacgggcctgaaactgatgcccgacgggctaatgtgc
gtcgaagatctgcgtatcccaactgtgcgtcccactgcaccgatgcaccggacaatcgaa
cagtcgtccaactcaaccacaaaacgacctcaagatgggtacagtgaaaagccggttgga
acaaaaactgaaagcaaccgcacagacacaactaaccaggttcacaaatctgatgccaaa
tcagaaaatgattacgtcggcatagccttgaatgtgatagccagtttagcgggcaccgct
ttggtagcaagcgtcatctttgtcgtataccgacgatgcacgcgcgccgtgaactcgatg
aacttcgagaatcccgtctaccacaagaccacggaggaccacttcagtctggagaagaat
gtgacgccacacatgttcgccactgccccggatgaggaggccaacaaccccctcttccaa
cctggcaccgaatgtgtttag
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integrated database retrieval system
