Drosophila sechellia: 6618190
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Entry
6618190 CDS
T01064
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dse
Drosophila sechellia
Pathway
dse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6618190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6618190
03012 Translation factors [BR:
dse03012
]
6618190
Enzymes [BR:
dse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6618190
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
6618190
Translation factors [BR:
dse03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
6618190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
NB-ARC
AAA_19
MavL
ResIII
ABC_tran
ATPase
TrwB_AAD_bind
AAA_7
TsaE
SRP54
Rad17
AAA_16
Motif
Other DBs
NCBI-GeneID:
6618190
NCBI-ProteinID:
XP_002042465
UniProt:
B4IFF5
LinkDB
All DBs
Position
2L:complement(20321719..20325002)
Genome browser
AA seq
939 aa
AA seq
DB search
MQRDTDSSGSRARKGNRPPGLRGKDIGLYYRNLARQKKKDRGEDAESKEPQIRLGCNVSA
PGGVLERVKELMEDYRRAPAREDKNVDAKFEQQFRHLLSVNFEEFVAETKERNANLDWIN
PKLDERLQLELEQSQLEENAKKRLAARRKLPTMKYADNIIHAVRENQVILIVGSTGCGKT
TQVPQILLDDAISRGCASSCRIVCTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESR
KARERASITYCTTGVLLQQLQSDPLMHSLSVLILDEIHERSVETDLLMGLLKVILPHRPD
LKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDILSKTNYEFQKSRDRRPKR
GPPERRMKHEAMIEPYLRRIRNSYDNRVLDKLRLPESEGCEDIDFIADLVYYICENEPEG
AILVFLPGYDKISQLYNILDKPKTPKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQR
KVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRKGRAGR
VRPGICYNLFSRAREDLMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPE
AIKIGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAAL
SFKSPFYSPLGKESRVDEVKRRMARNMRSDHLLVHNTIIAYRDSRYSHAERDFCYNNFLS
SMTLQQLERMKNQFSELLYNYKFLASPKCQDAASNKSSEKIPLLRAIIGAGLYPNMAHLR
KSRQIRNRVRAIHTMATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLLDSTM
VFPMALIIFGDGVEAGVTQNTPYLCVAKTYYFKCNQETADVVIELRSYLEKLLLKKACYP
APIEENGYEKQLIKAIELLLSLDERLGEVYISSDEIDDI
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgatacggactcttccggctctcgcgcccgcaagggcaaccgtccaccgggt
ctcaggggcaaggacatcggtttgtactatcgcaatcttgcccggcaaaaaaagaaggac
cgcggcgaggatgcggaatcaaaggagccgcaaatccgcttgggctgcaatgtcagtgct
cccggtggagtgctggagcgtgtgaaggagctgatggaggactataggcgggcacctgcc
agggaagacaaaaatgtggatgctaagtttgagcaacagtttcgccaccttttaagtgta
aactttgaagaattcgtggcggagaccaaggaacggaacgcgaatctggactggataaac
cccaagctggacgagagactgcagctggaactggagcaaagccagttggaggagaatgcc
aagaaacgtctggcagcacggagaaaactgcccactatgaaatacgccgataatattatc
catgctgtgcgggaaaaccaagtaatactaattgtagggagcactggatgtggcaagacc
actcaggtgcctcaaatcctcctcgacgacgccatttcccgcggatgtgcctcgtcctgt
cgcatcgtttgcactcagccacgaaggatttcagccatcgccattgccgagtgggtaagt
tacgagcgctgcgagagcctgggcaattcggtaggctaccagattcgcctagagagcagg
aaggccagggagagagcctccatcacgtactgcaccacaggggttctactgcagcagctt
caatcggatccactgatgcacagtttaagtgtcttgatcctggatgagatccacgaacgc
agcgtggaaacagatctcctaatgggtctactaaaggttatcctgccacacagacccgat
ctaaaggtgatcctgatgagtgcaactgtacgggagcaggatttctgtgactactttaac
aactgtcccatgttccgcatcgagggcgtgatgtttcccgtgaagatgctctacttggag
gatattctgtccaagacgaactacgagttccaaaagtcccgcgatcgtcgccccaagcgg
ggtccgcctgagcgcaggatgaagcacgaggctatgatagaaccgtatctacgacgcatc
aggaattcgtacgataatcgtgtgctcgacaagctgcgtttgccggagtcggagggctgc
gaggacattgattttatagccgatttggtttactacatatgcgaaaacgaaccagagggt
gccatattagtattcctgcctggttatgataagatctcccaactgtacaatatcctggat
aaaccaaagactccgaagggccaaaggtggcgggatcatatggccgtctttccattgcat
tccctaatgcaatcaggggaacagcaggcagtattcaggcgaccaccggcgggacagcgt
aaggtcattatctctacaattatcgccgaaacgtctgtgaccattgacgatgtggtttat
gtgataaactctggccggacgaaggccaccaactatgacatcgaaacgaacatacagtcg
ttggatgaggtttgggtgaccaaggcaaatacccagcagcggaaaggcagagcaggtcga
gtgcggccgggcatatgctataatctgttctcccgcgctagagaggatctcatggacgat
attccgacgccggagatactgcgctcaaagctggaatccataattttaagcctcaagctg
ctgcacatcgatgatccgtatcggttcctgcaaactcttattaatgcccccaatcccgag
gccatcaagatcggagtggaactgctgaagcgcatcgaggcgttggaccagacgggtacc
ctcactccactgggcatgcacttggcaaagctgcccattgatccgcagatgggaaaaatg
atcctgatgtcggcgctcttctgttgcttggatcccatcacttcggcggcggctgccttg
tcctttaagtcccccttctactcgcctttgggtaaagagagtcgagtggatgaagtcaag
cggagaatggcccgaaacatgcggagcgatcacctgctggtgcacaataccattattgcg
taccgcgatagccgctattcgcacgccgaacgagacttctgctataataatttcctcagc
tccatgacactgcagcagttggagaggatgaagaatcagttcagtgagctgctctacaac
tacaaatttcttgcatcccccaaatgccaggatgctgcttccaacaagagttctgagaag
attcccctactgagggccattataggagcgggactctatcccaacatggctcacttgcga
aagtcacggcagatcaggaatagagtacgcgctatccacaccatggcaacggacgatgga
cgccgcgttaacttccatccctcctcggtgaacagcggagagagtggctttgactcggca
tactttgtctacttccagcggcagaagtccaccgatctttttctgctcgactccacaatg
gtttttcccatggcactgatcattttcggagatggcgtggaagcgggagtgacccaaaat
acgccgtatctgtgcgtggccaagacatactactttaaatgcaatcaggaaactgccgac
gtagtcattgaattaagaagctatttggagaagcttctgctcaaaaaggcttgctatccg
gcgccgatcgaggagaacggatatgagaagcagttgatcaaagccattgaattgcttctc
tcgctggacgaaagactcggcgaggtatatatttcatccgatgaaatcgatgacatctaa
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