Drosophila sechellia: 6618329
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Entry
6618329 CDS
T01064
Name
(RefSeq) caprin homolog
KO
K18743
caprin-1
Organism
dse
Drosophila sechellia
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6618329
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
6618329
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
6618329
NCBI-ProteinID:
XP_002042601
UniProt:
B4IFU1
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All DBs
Position
3L:complement(18194006..18198526)
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AA seq
956 aa
AA seq
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MPSAANTATVTAATATTVAATASNTNNNSASKEKRSSIISLGGSVIPGTAVAAGAGAGVA
TTNGQSNSSAPATADGSQTDLASSNNNGNAAKSKANAVSAAAVVPEPYNPLKQLLVTIEH
KIRNLEKRKTKLESYRAIQSGGKELSGDQASAVAKYDAVLANLEFARELAKHIQQQSKEA
EKEQKKQARKDNLAKSIAETGKIREVLIIQNVLNCFNDEQVRSDFLSGENGAKKLENTDL
EVLEKFFFETQTRRPETADDVSFIATAQKSAELFYSTINARPKTFGEVSFEKLRSIFQQI
QDSGYLDKYYLVPLTENAVANSTDSGTGSGDGESGDVLNDGSGELDAELPSEPSARNSLE
EGLDKLHLGVQAELDQHQSYQQQQERPSHLLEQQHQRAPSVEHQQNSMVQQVPTQVYQAA
PQAGGTTTPVHVLYAPAPPAQQPPPHPHQLLSSPVNLQALQTGAVAPPAQQQQHPTHFAP
NVRAVEQNYFKQPPQHPQGPGIQAPQTAQQQQFMQHMRPLAEVLGTGRFHFLQDSELDNP
EALAPPPPTNQGLVFEQQPQQPNHVEEPPQAILTLTFTNQSFPSQQPKPQQQGPQQQQQL
FSPVLIHEQRQQPPQQQPQPMLIMPRLPTQQPQQPAPQGIGMQAGDVTSGFPYENAVVSY
EQQMQQQLKQQQQQQQQQQQNIQQLDEPSSVNSSSSVGAGGDVENNEWHARNNDTNAAAT
AALTNVLKGETTQATPPAPPTKWSSEMNAMSSAASNGSSNTSNKQEWATPRDHSTGGGNG
GYLDNNESNNHWNSSQGEGRRNSGNYQRRGGDRDNRDRDQGGRGDERRNGGDRGNYRSRQ
YGNSSNTNGRNSGNSSGVYFRNNESGNGGGNNYYQNGGGGTYNKESRYESSGGGGGSYRG
QRGGNQQRNVNGSYGGGRPMGDRGRGGAGNQGGGGGGYINRQNQSQRMPLGLENKN
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggctgcaaataccgctactgttaccgctgcaactgccaccaccgtcgccgcc
acagccagcaacaccaacaacaacagcgccagcaaggagaaacgctcctccatcatttcg
cttggcggttcggtaatcccaggaacagcagttgcagctggagctggagccggagtcgcg
accaccaatggccagagcaacagcagcgcaccagcgacagcggatggcagccaaacggat
ttggcgagcagcaacaacaatggaaatgctgccaaatcgaaggcgaatgccgtgtctgcc
gccgccgtcgttccagagccgtacaatccgctcaagcagctgctggtgacaatcgagcac
aagattcggaacctggagaagcgcaagaccaaactggagtcctatcgcgctatacagagc
ggcggaaaggaactgagcggggaccaggcttcggctgtggccaaatacgatgctgtcctg
gccaatctggagtttgcccgtgagctggccaagcatattcagcagcagtccaaggaggcc
gaaaaggagcagaagaagcaggcgcgcaaggacaacctggcaaagtcaattgctgagacg
ggcaagattcgggaggttttgatcattcagaacgtgctcaactgtttcaacgacgagcaa
gtgcgcagcgattttctaagcggcgagaacggagcgaaaaagttggaaaacaccgatctg
gaagtgctggagaagtttttctttgagacgcaaacacgccgtccggaaaccgctgacgat
gtaagcttcattgccactgcccagaagtctgccgaactcttttactcgaccatcaatgcg
cgtccgaagactttcggcgaagtgtccttcgagaagttgcgatctatcttccagcagatc
caggatagtgggtacctggacaagtactaccttgttccactgaccgagaacgcggtagcc
aacagcacggatagtggaactggaagtggcgatggagaaagcggtgacgtgttgaacgat
ggctctggcgaactagacgcggaactgccatctgagccatcggcccgaaactctttggag
gagggacttgacaagttacatttgggcgtgcaagcagaactggaccagcatcaatcctac
cagcaacagcaggagcgtccgagccatcttctggagcagcagcaccagagagctccatcc
gtggaacatcagcagaactcgatggtgcagcaggtgccgacccaggtctaccaggcagct
cctcaggccggaggaaccaccacgccagtgcatgttctgtacgctccagcgccacctgcc
cagcagccgccgccgcatcctcaccagctgttaagcagccccgtgaatctccaagccttg
caaacaggagcagttgctccaccagcacaacagcagcagcacccaacccactttgctccg
aatgtgagggccgtggagcaaaactacttcaagcagccaccgcagcacccgcaaggtcct
ggaatacaggcaccacaaacggcccagcagcagcagtttatgcagcatatgcgccctttg
gcggaggtcttgggcacaggacgcttccattttctgcaggacagtgaactggacaatcct
gaggctttagcaccgccgccacctaccaatcagggattggtatttgagcagcagccgcaa
cagcccaaccatgtcgaagaaccaccgcaggccatactaacgctgaccttcaccaaccag
tcgttcccatcgcagcagcccaagccccagcaacagggtccccagcagcagcagcagctt
ttctcgccggtgctgatccacgagcaacgtcaacagccaccacagcagcagccgcaacca
atgttgattatgccgcgtctgccaacccagcagccgcagcagcctgctcctcagggcatt
ggcatgcaggcgggcgatgtgacttcagggttcccatacgaaaatgctgtggtctcctat
gaacagcagatgcagcagcagctgaaacagcagcaacaacaacagcagcagcagcagcaa
aatatacagcagttggatgagccgtcatctgtgaacagctcctcgagtgtcggtgctggt
ggagatgtcgagaacaatgaatggcatgcccgcaataatgatactaatgctgccgccaca
gcagcgctgacgaatgtgctcaaaggtgagaccacccaggccacgccaccggcaccgcca
accaagtggagctcagagatgaatgccatgagtagcgccgcctcgaatggcagcagcaac
accagcaacaaacaggagtgggccacgcccagggaccacagcactggcggaggcaatggc
ggttatctcgataacaacgagagtaacaaccattggaacagctcgcaaggagaaggacgc
cgcaactctggcaattatcagcgtcgtggcggagacagggataaccgggatcgtgatcag
ggagggcgaggcgacgagcggcgcaacggcggcgacaggggcaactaccggtcgcgtcaa
tatggcaactcatctaacacgaacggacgcaattcgggcaattcgagcggtgtgtacttc
cgcaacaatgagtcgggcaatggtggaggcaacaactactaccagaacggaggaggtggc
acctacaacaaggagtcgcgctacgaatcttccggcggcggcggaggaagctatcgaggc
cagcgcggtggcaaccagcagcgtaatgtgaatggctcgtacggcggcggcaggcccatg
ggcgatcgtggtcgtggcggagcgggcaaccagggaggtggtggtggtggctacataaac
cgtcagaaccagtcgcaacgcatgccactcgggttggagaacaaaaactga
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