Drosophila sechellia: 6618511
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Entry
6618511 CDS
T01064
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
dse
Drosophila sechellia
Pathway
dse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6618511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dse03041
]
6618511
Enzymes [BR:
dse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6618511
Spliceosome [BR:
dse03041
]
Complex C
Other components
Step II factors
6618511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Microtub_bd
T2SSE
SLFN-g3_helicase
Flavi_DEAD
AAA_30
SRP54
cobW
ABC_tran
ATPase
Motif
Other DBs
NCBI-GeneID:
6618511
NCBI-ProteinID:
XP_002042771
UniProt:
B4IGB1
LinkDB
All DBs
Position
X:14006565..14029349
Genome browser
AA seq
1223 aa
AA seq
DB search
MSDDDESGVHRLEGTAGQETRGGLVIRKPKGAGAGGGFKVPQGSMLGLDKLAAKRRAEKE
RSERLISFQDSEFDDTGGGSSTPQANASGASSEFAFKKPDTKSFEKLRGQLREHKDDTPS
HTGGVSEKARERLREHIQRDRKRGPVSTTAAEGRDRDRDWDRDRRRDRDRDRDRDRDRDR
RQHRDRDRERERDRHRSWDRDRGRDRDRSMSERSVHTPREPGTPGGSGGISNSSWDDEDG
EFGQRNSDWDMPTPRRHGNKSGDWSVRSGSSRRNHGRQDDSARPTPAHRYNQWAHGRKRS
GATPWGEDPEALDLWEEEQRRLDREWYNIDEGYDDENNPFGGPNSEYFRKREEQLEQKRT
KRISAQQRQNNRDNELWERNRMLTSGVVTLISVNDDFDEEALERVHLLVHHIIPPFLDGR
IVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQKERRKAQKKHWELSGTKLGNIMG
VQRPQDEEEMRFDKEKDKADYRKDQKFADHMRDQDTGGKSDFSRKKTIAEQRRFLPVFAS
RQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKRV
SDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIMDEAHER
SLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSK
NTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILP
IYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGM
DALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLL
LKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQ
MLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQ
WRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDVVRKCICSAY
FYQAARLKGIGEYVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVD
GYWLAELGPMFFSVKESGRSGREKKKQAAEHLKEMEEQMLKAQHEMEERKQQAAEREEQL
ATKQEIATPGNATPRRTPARIGL
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgacgagtcgggtgtccatcggctggagggtaccgctggccaggagacg
cgcggcggcctggtcatccggaagcccaagggtgccggcgctggcggtggattcaaggtg
ccgcagggatccatgttgggcctggacaagctggcggccaagcgacgggccgagaaggag
cgatccgagcgactgatctccttccaggacagcgaattcgatgacaccggcggtgggagc
tccacgccgcaggccaacgcgtctggcgcctccagtgagttcgccttcaaaaaaccggac
accaagagcttcgaaaagctgcgagggcagctgcgggagcacaaagacgatacgccctcg
cacaccggcggcgtttccgagaaggcacgcgagcgtctgcgtgagcacatccagcgggac
agaaaacgcggcccagttagcaccacagcggcagagggcagggacagggatcgcgactgg
gatcgtgaccgacgcagggatcgagacagagatcgggatcgggatcgtgaccgcgacagg
cgccaacacagagacagagacagagagagggagcgcgatcggcaccgcagctgggaccgg
gatcgtggtcgcgatcgtgatcgctccatgtccgagcgcagtgtccacacgccgcgggag
ccgggaacaccaggcggcagcggcggcatatccaatagctcgtgggacgacgaggacggc
gagtttggccagcgcaactcggactgggatatgccaacgcccagacgccatggcaacaag
tcgggtgattggtcagtgaggagcggcagcagtcggcgaaatcacggacgccaggatgac
agtgcccggccaacgccagcacatcgctacaatcaatgggcccacggtcgcaagcggagc
ggcgcgacgccgtggggcgaggatcccgaggcgctggatctgtgggaggaggagcagcgt
cgcctggaccgcgagtggtacaacattgacgagggctacgacgatgagaacaatccattc
ggtggccccaactccgagtactttcgcaagcgcgaggagcagctggagcagaagagaaca
aagagaatcagcgcacagcagcgccagaacaaccgggacaacgagttgtgggagcgtaac
cgcatgctcacctcgggcgtggtcacattgatcagcgtgaacgacgatttcgatgaggag
gcgctggagcgagtgcatctgctggtgcatcatataataccgccgttcctcgacggccgc
atcgtgttcaccaagcagccggagccggtggtgcccgtcaaggatcccacctcggatatg
gcgctgctggcgcgcaagggtagcgccctggtgcgcaactatagggagcaaaaggagcgg
cgcaaggcgcagaagaagcactgggagctgagcggcaccaagctgggcaacattatgggt
gtacagcggccgcaggacgaggaagaaatgcgttttgacaaggagaaggacaaggccgac
tatcgcaaggaccagaagttcgccgatcacatgcgcgaccaggatacgggtggcaagagc
gacttctcgcgcaaaaagaccatcgcggagcagcgccgcttcctgcccgtgttcgcctcg
cgccaagagctgctcaacgttattcgcgagaactcggtgatcatcatcgtgggcgagacg
ggcagcggcaagaccacgcagctcacccagtatctccacgaggatggctacagcaagcgt
ggcatgatcggttgcacgcagccgcgtcgagtggccgccatgtcggtggccaagcgagtc
tccgacgagatggacacccagctgggcgaggatgtgggctatgccatccgtttcgaggac
tgcacgtcggagcgcacggtcatcaagtacatgacggatggtatactgctccgcgagagt
ctgcgggatccggaactggacagctactccgccatcatcatggacgaggcccacgagcga
tccctctccacggacgtgctcttcggattgctgcgcgagattgtggcccggcgacatgac
ctgaagctgatcgtgacctccgccacgatggactcgagcaaatttgccaccttcttcggc
aacgtgcccacgttcaccattccgggacgcacatttcccgtggacgtgatgttcagcaag
aacacctgcgaagattacgtggaatcggcggtgaagcaggcgctgcaggttcacctcacg
cccaacgagggcgacatgctcatcttcatgcccggtcaggaggacatcgaggtgacctgc
gaggtgctcgaggagcggctggcggagatcgataatgcgccggcactaagcatactgccc
atctattcgcaactgccgtccgatttgcaggcaaagatctttcagaaatccagcgacggg
ttgcgcaagtgtgtggtggccacgaacatagcggaaacatcgctcaccgtcgacggcatc
atctacgtcatcgattccggctactgcaaactgaaggtttacaatccgcgcatcggcatg
gacgcccttcagatctatcccatatcgcaggccaatgccaatcagcgcagcggtcgtgcc
ggacgcacaggacccggccaggcgtaccgcctgtacacacagcgccagtacaaggacgag
ctgttggccctcaccgtgcccgagattcagcgcaccaatctggccaatacggtgctgctg
ctcaagtcactgggcgtcgtcgatctgctgcagttccacttcatggatccaccgccccag
gataacattctgaactcgctgtaccagttgtggatcttgggagcactggaccacacgggt
gcgctgaccacactgggtcgccagatggccgagttcccgctggatccgccccagtgccag
atgctcatcgttgcctgtcgcatgggctgcagtgccgaggtgctgatcatagtttccatg
ctgtccgtgccctcgatcttctaccgaccaaagggccgcgaggatgaggcggatggtgtg
cgcgaaaagttccaaaggcccgagtctgatcacctgacctacctcaacgtttaccagcag
tggcgccagaacaattacagttcgacctggtgcaacgaacactttatccacatcaaggcg
atgcggaaggtgcgcgaggtgcggcagcagcttaaggacatcatgacgcagcagaaccta
agcgtaataagctgcggcatcgactgggacgttgtgaggaagtgcatctgctcggcgtac
ttctaccaggcggccaggctcaagggtatcggagagtatgtcaatctgcgaacgggcatg
ccctgccacctgcatcccacgtccgcgctgtatgggttgggcaccacgcccgactatgtc
gtctaccacgagctgataatgaccgccaaggagtatatgcagtgcgccaccgctgtcgat
ggctactggctggcggagttgggtcccatgttcttctcggttaaggagtccggccgcagc
gggcgtgagaagaagaaacaggcggccgagcacctcaaggagatggaggagcagatgctg
aaggcgcagcacgagatggaggagcgcaagcagcaggccgccgagcgggaggaacagctg
gccaccaagcaggagatcgccacaccgggcaatgccacgccccgacgcacgccggccagg
attggcctttga
DBGET
integrated database retrieval system
