KEGG   Drosophila sechellia: 6618706
Entry
6618706           CDS       T01064                                 
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
dse  Drosophila sechellia
Pathway
dse03013  Nucleocytoplasmic transport
dse03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dse00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    6618706
   03015 mRNA surveillance pathway
    6618706
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dse03019]
    6618706
Messenger RNA biogenesis [BR:dse03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     6618706
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 6618706
NCBI-ProteinID: XP_002042965
UniProt: B4IGV5
LinkDB
Position
3R:26187698..26190555
AA seq 781 aa
MSFRRRSSSSSSEAESRRDPAMAEVEKPTAATPPTDIPQATAAPGSDMPVAVTPTADATV
DVEPGTSPTQEPNSNSHPHDSEYDTASDLEGGEDYDDEESVSDSASGSGSEEESETDDED
EEGGSETDDGEGEQAMDRSVADSEAQKKVDEDRSNPQYIPKRGTFYEHDDRTAETEGEIL
IEPENGAGQAAAEPNGELNGLAAAGATPTGQTPQISQASKTMRKWQPASGGDRWSHDRFD
FTEQAPKSRAELLQTYGYDIRNEDAPPRARRRRRYTRGPSKYSRNWEDEQAYLKASNKER
KPPRPQDFPALNERKPRGPRTSSSREEKENRRSVGAGGLVPEKQQPLASGSNPHRSQERE
RERERERERDREPKNRNFGRMNGGPGRQNGMEFKKNSRGQQPRERERGPDQLDNRNQKPT
TPRSNQQQQQQQQPQHQQQPQQQRQPSQPQQSPQTPLSTSNLSQRLQQVQQRNDPSHVGS
VQMHSLASQNQAPQQQQQPLHQEQRNAPKRYSSLRRSQQEASQHLAEQQQQQMQQQLHLQ
QQQQQQQSQIMIQDPHVLMQIAYQQQELQAQLQTMQLGPPTAAGAVPTPPKPHAPPAAAY
PQAQAAPYYVTGTEPVPVPVPQAPYVNPASAAYLPTTPAAVAYAQAGPPVVTQPTPPPAQ
APPATQPAQPYQNYNTVGGTTYFVPPAQTTSRPSALPQRRPTNAIPILPPSEKHKAKGGA
KEEGISDNIDHIIDNMFVQRPSAFQATGEGATPGGGIKDEAAATPPATEQNLQPVPATGQ
E
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgtcattccgcagaagaagcagcagcagcagtagcgaggcagaaagccgaagagacccc
gcgatggccgaagtggagaaaccaacggcggccactcccccgaccgacatcccccaggcc
acggctgcacctggcagcgatatgccagtggctgtaacgcccacagcggatgccaccgtg
gacgtcgagccgggcacctcacccacccaggagcccaactccaattcgcatccgcacgac
tccgagtacgacacggccagtgatctggagggcggagaggactatgacgacgaggagagt
gtcagcgacagcgcaagtggcagtggaagcgaggaggaatctgagacggacgacgaggac
gaggaggggggcagcgaaacggatgatggcgagggggagcaagcgatggaccgctccgtc
gccgacagtgaggcccagaagaaggtggacgaggaccgcagcaatccgcagtacatccca
aagcggggcactttctacgagcacgacgaccgaacggcggagaccgagggagaaatcctt
atcgaacccgaaaacggtgctggccaggcggcggcggagccaaatggcgaactaaatgga
cttgcggcagccggtgccacgccgactggccaaacgccacagatctcacaggcatcaaag
accatgcgaaaatggcagccagcttcaggcggtgatcgctggtctcacgatcgattcgat
ttcacggagcaggctcccaaatcccgtgcagagttgctgcaaacatacggctacgacatt
agaaacgaagacgcaccgcccagagccagacgtcggcggcgatatacgcgtggccctagt
aaatactcaagaaactgggaggacgagcaggcctacctcaaagccagcaataaggagcgt
aagccgccgcggccacaggacttcccggcgctcaacgaaagaaagccacgtggtccacgg
acatcatcctcgcgtgaggaaaaggaaaaccgacggtccgtcggtgctggaggcttggtt
ccagagaagcaacagcccttggccagtggctccaatcctcatagatcccaggagcgtgaa
cgggagagggaaagagagcgggaacgtgatcgagagcccaagaatcgcaactttgggcgg
atgaacggcggccccggacgtcagaatggcatggagtttaagaagaacagccgtggacag
cagccacgagagcgggaacggggaccagaccaactggacaaccgtaaccagaagccaacc
actccacgctccaaccaacaacaacaacagcagcagcaacctcagcatcagcaacagcca
cagcagcaacgacagccgtcccagccgcagcagtctccacagacgccgctttccacgtca
aacctttcgcagcggctccagcaggtgcagcaacgcaacgatcccagccatgtgggcagt
gtccagatgcattctcttgctagccaaaatcaggcgcctcagcagcagcagcagccactg
catcaggaacaacgaaatgcgcccaagcggtactccagcttgcgtcgctcccagcaggag
gcatcacagcacttggctgagcagcagcaacagcagatgcagcagcagttgcatcttcaa
cagcaacagcagcagcaacaatcgcagatcatgattcaggacccccatgttctgatgcag
atcgcctatcagcaacaggagctgcaggcccaactgcagaccatgcaactgggaccacct
actgccgcaggagcagttccaacaccaccaaagccacatgccccgccggcagccgcatat
ccgcaagcacaggcggcaccgtactatgtgaccggaacggagccagttccagtgcccgtg
ccccaggcaccgtatgtgaatccggccagtgccgcttacttgccaaccactccggctgcc
gtggcgtacgcccaagcagggcctccggttgtaacacaacccacaccgccgcccgctcag
gcaccgcccgcaacgcagccggctcagccgtatcagaactataacacggtcggtggcaca
acctactttgtgccgccggctcaaaccactagccgaccaagtgctctgccccagcgtcgt
cccaccaatgctattcccattctcccgccctccgaaaagcataaggccaagggtggagcc
aaggaggagggcatctcggacaatatagatcacatcattgacaacatgttcgtgcagcga
ccttcggccttccaggccaccggcgaaggcgccactccaggtgggggaataaaggacgag
gcggcagccacaccaccggctaccgagcagaaccttcagccagttccggccactgggcag
gaatga

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