Drosophila sechellia: 6618706
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Entry
6618706 CDS
T01064
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
dse
Drosophila sechellia
Pathway
dse03013
Nucleocytoplasmic transport
dse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6618706
03015 mRNA surveillance pathway
6618706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6618706
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
6618706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
6618706
NCBI-ProteinID:
XP_002042965
UniProt:
B4IGV5
LinkDB
All DBs
Position
3R:26187698..26190555
Genome browser
AA seq
781 aa
AA seq
DB search
MSFRRRSSSSSSEAESRRDPAMAEVEKPTAATPPTDIPQATAAPGSDMPVAVTPTADATV
DVEPGTSPTQEPNSNSHPHDSEYDTASDLEGGEDYDDEESVSDSASGSGSEEESETDDED
EEGGSETDDGEGEQAMDRSVADSEAQKKVDEDRSNPQYIPKRGTFYEHDDRTAETEGEIL
IEPENGAGQAAAEPNGELNGLAAAGATPTGQTPQISQASKTMRKWQPASGGDRWSHDRFD
FTEQAPKSRAELLQTYGYDIRNEDAPPRARRRRRYTRGPSKYSRNWEDEQAYLKASNKER
KPPRPQDFPALNERKPRGPRTSSSREEKENRRSVGAGGLVPEKQQPLASGSNPHRSQERE
RERERERERDREPKNRNFGRMNGGPGRQNGMEFKKNSRGQQPRERERGPDQLDNRNQKPT
TPRSNQQQQQQQQPQHQQQPQQQRQPSQPQQSPQTPLSTSNLSQRLQQVQQRNDPSHVGS
VQMHSLASQNQAPQQQQQPLHQEQRNAPKRYSSLRRSQQEASQHLAEQQQQQMQQQLHLQ
QQQQQQQSQIMIQDPHVLMQIAYQQQELQAQLQTMQLGPPTAAGAVPTPPKPHAPPAAAY
PQAQAAPYYVTGTEPVPVPVPQAPYVNPASAAYLPTTPAAVAYAQAGPPVVTQPTPPPAQ
APPATQPAQPYQNYNTVGGTTYFVPPAQTTSRPSALPQRRPTNAIPILPPSEKHKAKGGA
KEEGISDNIDHIIDNMFVQRPSAFQATGEGATPGGGIKDEAAATPPATEQNLQPVPATGQ
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccgcagaagaagcagcagcagcagtagcgaggcagaaagccgaagagacccc
gcgatggccgaagtggagaaaccaacggcggccactcccccgaccgacatcccccaggcc
acggctgcacctggcagcgatatgccagtggctgtaacgcccacagcggatgccaccgtg
gacgtcgagccgggcacctcacccacccaggagcccaactccaattcgcatccgcacgac
tccgagtacgacacggccagtgatctggagggcggagaggactatgacgacgaggagagt
gtcagcgacagcgcaagtggcagtggaagcgaggaggaatctgagacggacgacgaggac
gaggaggggggcagcgaaacggatgatggcgagggggagcaagcgatggaccgctccgtc
gccgacagtgaggcccagaagaaggtggacgaggaccgcagcaatccgcagtacatccca
aagcggggcactttctacgagcacgacgaccgaacggcggagaccgagggagaaatcctt
atcgaacccgaaaacggtgctggccaggcggcggcggagccaaatggcgaactaaatgga
cttgcggcagccggtgccacgccgactggccaaacgccacagatctcacaggcatcaaag
accatgcgaaaatggcagccagcttcaggcggtgatcgctggtctcacgatcgattcgat
ttcacggagcaggctcccaaatcccgtgcagagttgctgcaaacatacggctacgacatt
agaaacgaagacgcaccgcccagagccagacgtcggcggcgatatacgcgtggccctagt
aaatactcaagaaactgggaggacgagcaggcctacctcaaagccagcaataaggagcgt
aagccgccgcggccacaggacttcccggcgctcaacgaaagaaagccacgtggtccacgg
acatcatcctcgcgtgaggaaaaggaaaaccgacggtccgtcggtgctggaggcttggtt
ccagagaagcaacagcccttggccagtggctccaatcctcatagatcccaggagcgtgaa
cgggagagggaaagagagcgggaacgtgatcgagagcccaagaatcgcaactttgggcgg
atgaacggcggccccggacgtcagaatggcatggagtttaagaagaacagccgtggacag
cagccacgagagcgggaacggggaccagaccaactggacaaccgtaaccagaagccaacc
actccacgctccaaccaacaacaacaacagcagcagcaacctcagcatcagcaacagcca
cagcagcaacgacagccgtcccagccgcagcagtctccacagacgccgctttccacgtca
aacctttcgcagcggctccagcaggtgcagcaacgcaacgatcccagccatgtgggcagt
gtccagatgcattctcttgctagccaaaatcaggcgcctcagcagcagcagcagccactg
catcaggaacaacgaaatgcgcccaagcggtactccagcttgcgtcgctcccagcaggag
gcatcacagcacttggctgagcagcagcaacagcagatgcagcagcagttgcatcttcaa
cagcaacagcagcagcaacaatcgcagatcatgattcaggacccccatgttctgatgcag
atcgcctatcagcaacaggagctgcaggcccaactgcagaccatgcaactgggaccacct
actgccgcaggagcagttccaacaccaccaaagccacatgccccgccggcagccgcatat
ccgcaagcacaggcggcaccgtactatgtgaccggaacggagccagttccagtgcccgtg
ccccaggcaccgtatgtgaatccggccagtgccgcttacttgccaaccactccggctgcc
gtggcgtacgcccaagcagggcctccggttgtaacacaacccacaccgccgcccgctcag
gcaccgcccgcaacgcagccggctcagccgtatcagaactataacacggtcggtggcaca
acctactttgtgccgccggctcaaaccactagccgaccaagtgctctgccccagcgtcgt
cccaccaatgctattcccattctcccgccctccgaaaagcataaggccaagggtggagcc
aaggaggagggcatctcggacaatatagatcacatcattgacaacatgttcgtgcagcga
ccttcggccttccaggccaccggcgaaggcgccactccaggtgggggaataaaggacgag
gcggcagccacaccaccggctaccgagcagaaccttcagccagttccggccactgggcag
gaatga
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