Drosophila sechellia: 6619829
Help
Entry
6619829 CDS
T01064
Name
(RefSeq) non-canonical poly(A) RNA polymerase protein Trf4-1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
dse
Drosophila sechellia
Pathway
dse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6619829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6619829
03016 Transfer RNA biogenesis [BR:
dse03016
]
6619829
Enzymes [BR:
dse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
6619829
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
6619829
Transfer RNA biogenesis [BR:
dse03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
6619829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
Motif
Other DBs
NCBI-GeneID:
6619829
NCBI-ProteinID:
XP_002044042
UniProt:
B4IJY2
LinkDB
All DBs
Position
X:8310434..8319311
Genome browser
AA seq
1000 aa
AA seq
DB search
MDPFVGWFQKEQEGPSLCTWLKIWETNAQEMGALLNQQLQQTTAINGSTSSNSSSSNSGN
NNNNNNNNNNINNTITNTTNNTGNNSSAKPYLSRPYSSLNRVLNLRADSLEILQQQQQQQ
QLNGTTQRNSANINPTSGGSTSSSADSTTNRDNNSPANSSSTNGPGAGTGTSTGAGGTGT
NSPVTTASSTAATTTGPATSMSDTSNNPPQSTTTPASRTNSIYYNPSRKKRPENKAGGAH
YYMNNHMEMIAKYKGEPWRKPDYPYGEGVIGLHEEIEHFYQYVLPTPCEHAIRNEVVKRI
EAVVHSIWPQAVVEIFGSFRTGLFLPTSDIDLVVLGLWEKLPLRTLEFELVSRGIAEACT
VRVLDKASVPIIKLTDRETQVKVDISFNMQSGVQSAELIKKFKRDYPVLEKLVLVLKQFL
LLRDLNEVFTGGISSYSLILMCISFLQMHPRGIYHDTANLGVLLLEFFELYGRRFNYMKI
GISIKNGGRYMPKDELQRDMVDGHRPSLLCIEDPLTPGNDIGRSSYGVFQVQQAFKCAYR
VLALAVSPLNLLGIDPRVNSILGRIIHITDDVIDYREWIRENFEHLVVVDRISPLPTAAP
TAYATANGAPKYVIMPSGAVVQQLYHHPVQVPTAHGHSHAHSHGHAHPGAHLCQPYVTGT
TVSAVTTTTTMAVVTVGVSAGGVQQQQQQQNATAHTHAQQQSQNQSQSRHRRGSTSSGDD
SEDSKDGDVVETTSGAQEVVDITLSPPNGLSNMSMPMPVHAVGMPASNSWSGNGNGNGNS
SSSTGSSPEIAHIAAQEMDPELEDQQQNQQQQETSGGNGFIRPGDGGTGSSRGGGDGSGG
RNYNQRSNHNSSGYYHQQYYVPPPMQQQLSKSNSSSNYHQQHHHSHSHGNHSHRQQHHHQ
QQHHHQQRPQHLRVGGGSRYQKSLGGSPITSAGNASNSSSNCSNSSSSSGSNNSRLPPLR
GTLVNSSSAISIISISSESSIASSSSSSSRSGQDQQRDER
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggatccatttgttggctggtttcagaaggaacaggagggaccatcgttgtgcacatgg
ttaaagatttgggagacgaatgcccaggagatgggcgcattgcttaatcaacagctacag
cagacgacggcgatcaacgggagcacgagcagcaacagcagcagcagcaatagtggtaac
aacaacaacaacaacaacaataataataacatcaataacactatcaccaacacgaccaat
aacactggtaacaattcatcggccaaaccctacttatcgcgaccctacagctcgctaaat
cgggtgctcaatttacgagcggattccctggagatcctgcagcagcaacaacaacagcag
cagctcaacgggaccactcagcgcaatagcgctaacatcaaccccaccagcggcggcagc
actagctcgtcggcagattccaccacgaatcgggacaataactcacccgccaacagcagt
tcaaccaacggaccaggagcaggaacgggaacgtcaacaggagcaggaggtaccggtaca
aatagtccggtgaccacagcgtcaagcacagctgcgaccacgactggtccagccactagt
atgagcgataccagcaacaacccgccacagtcaacgaccacgcccgccagccgaacgaac
agcatctactacaatccgtcgcggaagaaacggccggagaacaaggctggcggagcccac
tactatatgaacaaccatatggagatgatcgccaagtacaagggtgaaccgtggcgcaag
ccggactatccgtatggcgagggcgttatcgggctgcacgaggagatcgagcatttctat
cagtacgtcctgcccacgccctgcgaacacgccatccgcaacgaggtggtcaagcgcatc
gaggccgttgtccattccatctggccacaggcggtagtcgagatctttggctcctttcgc
actggcctttttttgcccacctccgacatagatctcgttgtgttaggtttgtgggagaag
ctgccgctgagaacgctagagttcgagctagtgagccgcggtatcgccgaggcttgtacg
gtgcgtgttctggacaaggcatcagtgcccatcatcaagttaacggaccgggaaacgcaa
gtgaaggtagacatatcgttcaacatgcagagtggtgttcagtcggcggagctgattaag
aagtttaagcgcgactatccagtgctggagaagctagtgcttgtgctgaagcagttccta
ctgctccgcgatctcaacgaggtgttcacggggggcatctcctcctactcgctgatcctt
atgtgcatcagcttcctgcagatgcatccgcgcggtatctaccacgatacagccaatctg
ggggtgcttctcctcgagttcttcgagctttacggacgtcgcttcaactacatgaagatc
gggatctccataaagaacggtggccgctacatgcccaaggatgagctgcagcgtgacatg
gtcgatggccatcgtccctcgctcctgtgcatcgaggatccgctgacgccgggcaatgat
atcggtcgaagcagctacggcgtcttccaggtgcaacaggcattcaagtgcgcctaccgc
gtgctcgccctcgccgtcagtccgctcaaccttctcggcattgatccgcgcgtcaactcg
atactgggtcgaatcatccacatcaccgacgacgtgatcgattatcgcgaatggatccgc
gagaacttcgaacatctggtggtggtggatcgcatctcgccgctgcccactgccgctccc
actgcgtacgccaccgccaatggggcgccaaaatatgtgattatgccctcgggcgccgtt
gtccagcagctgtaccatcatccggtgcaggtgcccaccgctcacgggcacagccatgcg
cacagtcacgggcacgcgcatcctggcgcccatctgtgccagccgtatgtgaccgggacc
actgtatctgctgtaacgacgactacaacgatggcggtggtgaccgtgggcgtttcagcc
ggcggagtccaacagcagcaacagcaacagaatgcaacggcgcatacccacgcgcagcag
cagtcacagaaccaatcgcagtcgcgccatagacgcggcagcacctcgtcgggcgatgac
tccgaggatagcaaggacggtgatgttgtcgagacgacgtcgggtgctcaggaagtcgtt
gacatcacgctatcgccgccaaatggcctgtccaacatgtccatgcccatgccagtgcac
gcggtcggaatgccagcgtcgaacagttggagcggtaatggcaatggaaacggaaacagc
agctcatccacaggctcgtcgccggaaatcgcacacatcgctgcccaggaaatggacccc
gagcttgaggatcaacagcaaaatcagcagcaacaagaaacttctggaggcaatggcttc
atacgaccgggtgacggcggcaccggttccagcaggggaggcggtgacggcagtggcgga
cgcaattacaaccagcggagcaaccacaactccagcggctactaccaccagcagtactac
gtgccaccgccgatgcaacagcagctgagcaagtccaactcctcctccaactatcaccag
caacaccatcacagtcacagccatggcaatcatagtcaccgacaacaacatcatcatcag
cagcagcaccaccaccagcagcggccgcagcatctgcgggtgggcggcggcagtcgatac
cagaaatcgttgggcggatcgcccatcaccagtgctggcaatgcgtcgaacagcagcagc
aattgcagcaacagcagcagcagcagcggcagcaacaacagccgactgccgccgctgagg
ggaacactggtgaattcgtcgtcagcaatatcaatcatttccatatcctcagaatcatcc
attgctagcagcagctccagttcgtcacggtccggacaggatcagcagcgtgacgagcga
tag
DBGET
integrated database retrieval system
