Drosophila sechellia: 6620157
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Entry
6620157 CDS
T01064
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
dse
Drosophila sechellia
Pathway
dse03013
Nucleocytoplasmic transport
dse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6620157
03015 mRNA surveillance pathway
6620157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6620157
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
6620157
mRNA cycle factors
P-body specific factors
6620157
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Umbravirus_LDM
DUF7794
Motif
Other DBs
NCBI-GeneID:
6620157
NCBI-ProteinID:
XP_002044369
UniProt:
B4IKV9
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Position
X
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AA seq
1237 aa
AA seq
DB search
MLANDSATTDSEVSTPPLSRKDLADDVAEGDNDNDIDTGDTDANADEDVDAAAASALEAE
EREELQQFISELRDKIESKRQLRLQNSTIELPGEEYFAKLDSSLKKNTAFVKKLKLFTAT
QLDGLLREISALNLSKYISEICAALVEAKLKMTDVPAVVTLASRLHCTYADFDVHFLEAW
QKALNIKATEKIGNPSKLRVDLRLFAELISSGVIQMKPGLAQLGVVLVHLIAMDKDDHSN
FSIILSFCRHCGEEYAGLVPQKMQQLATKYGMEVPKSDFLTADKQLNLRTMLKGYFKALC
KHVLAEQAELMNMTKNIRRTMECKGEISTEKREKCELMQAGFDKLLASAQSLSELLGEPL
PELAKESEGCNPGIVIDNMLDSASFGVLDPWGDEETRAFYTDLPDLRQFLPNFSAPKVDL
ETLEEPSELTEEAIDANLDAEMDLDDPPSTTSDTTPENPIEEQPTPVSSAEDLKPQKMGN
ALMELGRQQQQQSQLNQNPTQIQNQMRQQFDGFLVNLFNCVNKELIDSAAIEFLLNFNTK
HQRKKLTRTIFSVQRTRLDILPYLSRFVAIVHMCNTDVAADLAELLRKEFKWHIHKKNQL
NIETKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFQHHQIEMACAFVEVSGVYLYNCR
DARLLMNVFLDQMLRLKTATAMDSRHAAQIESVYYLVKPPESSKREAMVRPAMHEYIRYL
IFEELCKQNVDRCIKMLRRIDWQDPETNCYAIKCLSKAYLLRFQLIRCLADLVSGLSSYQ
PRAVTIVIDNVFEDIRAGLEIHSPRMAQRRIAMAKYLGEMYNYKLVESTNILNTLYSIIS
LGVSNDQNVISPLDPPDSLFRLKLACMLLDTCAPYFTSQATRKKLDYFLVFFQHYYWFKK
SHPVFSKTENTSDLFPILMDHTYRDCLLNVRPKLKIYKSLEQAKAAIDHLQEKLYPQLKT
TNNPQDPSLGTISEISEIDEGATDEDSGSSNDQRERQMSGQEPDQSNEWTENEAEPPLPP
PPPPEKSKEDLEFEHLYDKMTTDSYQERLKEPIKATAKDIPVPMMARLQKKSYDQITGAQ
TIGPGTNNTPQISKAAANQDGTPGSPGADSPDGNGKSSDGAGGSDAGASGASGPTSVPFV
LMVRGHKGGKQQFKSFVAPSDSHLATNLMRQEQMLREEKEKVKRLTLNITERIEEEDYQE
SLMPPQHRNFTQSYYQKPSKHKFKHQKGAPDADLIFH
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgctagccaacgattctgcaacgacagacagcgaggtgtccacaccgccgttgtcgagg
aaagatttggcagatgatgttgccgagggtgacaacgacaacgacatcgataccggcgac
acggacgcaaatgcggatgaagatgtggacgcggctgctgccagtgccctggaggccgaa
gagcgcgaggagctgcaacagttcataagcgagctgcgcgacaagatcgagagcaagcga
cagctgcgcctgcaaaactccacaatcgagctgcccggtgaggagtacttcgccaaactg
gactccagtctcaaaaagaacacggcattcgtcaagaaactgaagctattcacggccaca
cagctggacggactattgcgtgagatatccgctctaaatttgagcaaatacatctcggaa
atatgcgccgcgctggtcgaggccaagctgaaaatgacggatgtgccggcggtggtgacg
ctggcctcccggctgcactgcacatatgccgacttcgatgtccattttctggaggcctgg
caaaaggcactgaacatcaaggccaccgagaagattggcaatccgagcaaactgcgcgtg
gaccttcgcctgtttgccgaactaatcagctctggtgtgatccaaatgaagcccggattg
gcccaactgggtgttgtcctggtgcacctgattgccatggacaaggatgaccacagcaac
ttctcaatcatcctctcattctgccggcactgcggcgaggagtacgccggcctagtgccg
caaaagatgcaacagttggccaccaaatacggaatggaggtgccgaaatccgacttcctg
actgccgacaagcagctcaatctgcggaccatgcttaagggttacttcaaggccctgtgc
aagcatgtcctggccgaacaggccgaactgatgaacatgaccaagaacatacgacgcacc
atggagtgcaagggtgagatatccacggagaagcgcgagaagtgtgaactgatgcaggcc
ggattcgataagctgctggcctccgcccaatcactgtcggaattgttgggtgaaccactg
cccgagttggccaaggaatctgagggttgtaatccgggcatagtcatcgacaacatgctg
gacagtgcctccttcggtgtgctcgatccgtggggcgacgaggagacccgagccttctac
acggatttgcccgatttgagacagtttctgccgaacttttcggcacccaaagtcgatttg
gaaacgttagaggagcccagtgagctaaccgaagaagcgatcgatgccaatctagatgcc
gaaatggatctagatgatccaccatccaccacctcggatacgactccggaaaatccaatc
gaagagcagccaacgccagtttcctctgcggaggatctcaagccgcagaagatgggtaac
gctctgatggaactgggtcgccagcagcagcagcaaagtcagctcaaccagaatccgacc
cagatccaaaaccagatgcgtcagcagttcgatggcttcctggtcaacctatttaactgt
gtgaacaaggagctgatcgattcggcggccatcgagttcctgctcaacttcaacaccaag
catcaacgcaagaagctgacgcgtacgatattctcggtgcagcgtacgcgtctggatatc
ctgccctatctctcccgcttcgtggccattgtgcatatgtgcaataccgatgtggccgcc
gatttggccgaactgctgcgcaaggagttcaagtggcacattcacaagaagaaccagctg
aatatcgagacgaagctcaagatcgtgcgattcattggcgaactggttaagtttgggttg
tttaagaagttcgatgccttaggatgtctgaagatgctgctaagggactttcagcatcat
caaatcgagatggcctgtgcctttgtggaagtcagcggcgtgtatctgtacaattgccgg
gatgcccgtctgctgatgaatgtgttcctggaccagatgctgcgcttgaaaacagccacg
gcaatggactcgcgacatgcggcgcagattgagagcgtgtactatttggtaaagccgccg
gaatcgtccaagcgagaggccatggttcggccggcaatgcatgagtacatccgttacttg
atcttcgaggagctttgcaaacagaacgttgatcgctgtatcaaaatgctgcgccgcatc
gactggcaggatccggagacgaattgttatgccattaagtgcctcagcaaggcgtatctg
ctgcgcttccagctcatccgctgcctggccgatctcgtatccggactgagctcctatcag
ccacgagcggttaccatcgtgatcgataatgtgtttgaggatatccgcgctggcctcgag
atccattcgccacgcatggctcagcggcgcatcgcgatggccaagtacctgggcgagatg
tacaactacaagctggtggagtccacgaacattctcaatacgctgtactccatcatctcg
ctgggcgtatcgaatgaccagaatgtcatctcgccactggatccgcccgatagcctgttc
cgactgaagcttgcctgtatgctactggacacgtgtgcaccctacttcaccagccaggcc
acgcgaaaaaaactggactacttcctggtcttcttccaacactactattggttcaagaaa
tcccatcccgtgttcagcaagacggagaacacctccgatttgttccccatcctaatggat
cacacctatcgcgactgtctactcaatgtgcggcccaagctcaagatttacaagagtcta
gagcaggccaaggcggcgattgatcatctgcaggagaagctctatccgcagctaaagact
accaataatcctcaggatccgtcgctgggcacaatcagtgaaataagcgagatagacgag
ggcgccactgatgaggattctgggtcatcgaatgatcagcgggagcgccagatgtcgggc
caagagccggaccagagcaacgagtggacagagaacgaggcggagccaccgctgccgccg
cccccgccgccagaaaagtctaaggaggacctagagttcgagcacttgtacgataaaatg
accacagactcgtaccaagaacggcttaaggagccgatcaaggctacggccaaagacata
cctgtgccgatgatggcgcgcctgcaaaaaaagtcgtacgatcaaataactggtgctcag
accatcggccctgggaccaacaatacgccacagatctcaaaggcggctgccaatcaggac
ggaacgcccggctctccaggtgcagattcaccagatggcaacggcaaatccagcgacggt
gcgggtggtagcgatgctggtgcttctggtgcttctggtcctacatctgtgccctttgtg
ctgatggtgcgcggccacaagggtggaaagcaacaatttaagtcgtttgtggcgccatcc
gactcgcacttggccaccaacctaatgcggcaggagcagatgctacgcgaggagaaggag
aaggtcaagcgcctcacgcttaacataactgagcgcatcgaggaggaggactaccaggag
tcgctgatgccgccgcagcatcgaaacttcacccagagctactaccagaagcccagtaag
cacaagttcaagcaccaaaagggtgcgcccgatgcagacctcatctttcactga
DBGET
integrated database retrieval system
