Drosophila sechellia: 6620478
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Entry
6620478 CDS
T01064
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
dse
Drosophila sechellia
Pathway
dse04140
Autophagy - animal
dse04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
6620478
04148 Efferocytosis
6620478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dse04131
]
6620478
Membrane trafficking [BR:
dse04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
6620478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_Prp19
Beta-prop_WDR19_2nd
TPR_7
WD40_CDC20-Fz
WD40
ANAPC3
Beta-prop_EML_2
TPR_12
WDR55
TPR_10
Motif
Other DBs
NCBI-GeneID:
6620478
NCBI-ProteinID:
XP_032570359
LinkDB
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Position
2L:complement(23756670..23779044)
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AA seq
844 aa
AA seq
DB search
MAKALPLISCDSWADSINEEDVEPKFKYHRLANDLKYMLNADVITCSAVHLKFLIFGTFR
GRVCIFDHQGNSVYSNLSASERYTHQVAVNNIDVDHKGEYVATCSDDGKVNITGLFSSDN
NHSLSFGKCIKVVSLEPDSKAHIKRFVVGDDKLILYERNLLKKLKPVELCSVEGSVLSIC
WHGNFIAWASHIGVRVYDLNERCSLGLIKWEVPPQERLENFRCHLRWSNKNTLLIGWVDT
IRVCVIRKRNSIEASTGNLPVYIVDPISTFQTTFYVCGLAPLSAKQLVVLGFRKEKSSCF
KAQRPVLCVIEYKMNSSEEICTDSLTLRGFEEYTVNDYSLGGIIEENRFYIVAPKDIVVA
SLIETDDRIEWLIKHSKFEEAMELISANGGNVPVLSVAKLYVNHLLALKKYDDAAKLCLR
MLGNDKVLWEEEVFKFVKCQQLRSVSAYLPTSDECKLDPHVYEMVLYEFLKFDVCGFLNL
IKEWPSHLYDGLAVINAIHDNFRKHHANQLLESLALLYSYQGDFESALRMYLKLQNKDVF
QLIRRYELYDVISKLIIPLIQLDRNCAFEILLDKKKIKTEIVVHHLEHKQEYLYWYLDSL
LKKDPSNVFQKKLISLYAIFDRNKLLPFLKRSKDYDIQEALVICKQENFYPEIVYLLGCM
GGVEAAEALNIIIHRIRDIEMAIEFCKEHDDNDLWNALINEFSNHPEIVTKVLDGIVDYF
SPAVVVGKIKMGQNIPNLRQSLIKMLWHYNLQGEILSSAQQIQLNDYFEIHSEIVTTQRR
GQQVSNEQMCSLCHRPVLMLRGGMSWALDLDDFRGLCGCGKHPLLRTLNQELLGISGQKA
KDCT
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagctttgccgctcatcagttgtgactcttgggccgatagcataaatgaggaa
gatgtggagcccaaattcaagtatcaccgtctcgcaaacgatttgaaatacatgctcaat
gctgatgtcatcacttgtagcgctgtacacttaaagtttcttatatttggaactttccga
gggcgtgtttgtatatttgaccatcaaggaaactcagtctactcaaatcttagcgctagc
gaacggtacactcaccaagtggcagtaaacaatatcgatgtagatcataagggcgagtat
gtggccacatgctccgacgacggaaaagtcaacataacggggttgtttagctctgataac
aatcacagtctcagctttggcaaatgtataaaggtcgtatcactggagcccgattccaaa
gctcacattaagagatttgtagtgggcgacgacaaacttattttgtacgagcgtaacttg
ctaaagaagcttaaaccagttgaactgtgctcagtcgaaggcagtgttttgtcgatctgc
tggcatggcaactttattgcctgggcaagtcatataggagttcgagtctacgatttaaac
gaaagatgctcacttggattaataaaatgggaggttcctcctcaggagcgactagaaaat
tttcgatgccaccttcgctggtccaacaagaatacattgttgattggctgggtagacact
attcgggtttgcgtaattcgaaagagaaattcaatcgaagcttcaactggcaatctgcct
gtctacattgtggatccaatctcgacatttcaaacaactttctacgtatgtgggcttgca
ccattatctgcaaagcaattggtggttcttggctttcgcaaggaaaaaagctcttgtttt
aaagcccaacgacctgtattatgcgttattgaatacaaaatgaatagcagcgaagaaatc
tgcacagacagtttaactttacgcggctttgaggagtacaccgtgaatgactatagtctg
ggtggcataatcgaggagaatcggttttatattgtggccccaaaggatattgttgtagct
agtcttattgaaacagatgatcgtatagaatggttgattaaacacagtaaatttgaggag
gcaatggaacttatatctgcgaatggaggtaatgttcccgtactttccgttgccaaactt
tatgttaaccatttactggcgcttaagaagtatgatgacgcagcaaaactttgcctccgc
atgctaggcaatgacaaagtcctttgggaagaggaagtttttaagtttgtaaagtgtcag
cagctacgatcagttagcgcctatctgccgacctccgacgaatgcaaacttgatccccat
gtatacgaaatggttttatacgagtttctcaaatttgatgtatgtggtttcttgaatctt
atcaaagaatggccatctcatctttatgacggcctggctgttattaacgctattcacgat
aactttcgaaagcaccatgccaatcagttgctggaatcattggctcttttgtattcctat
caaggtgacttcgaaagtgcccttcgcatgtatttaaagttgcagaacaaggatgtcttt
caattaattcgccggtatgagctttacgatgtcatttcaaaactgattattccacttatt
caattggatcgtaactgcgcctttgaaatactacttgacaagaaaaaaataaagactgag
atagttgtccaccacctagagcacaaacaagagtatctgtactggtacttagattcttta
cttaaaaaggatcccagtaatgtgtttcaaaaaaaacttatctccttatatgccattttc
gatcgaaacaaactattgccctttctaaagcgttcaaaggactatgacattcaggaggcg
ttggtcatatgcaaacaggaaaacttttatccagaaatagtctacctgctcggttgtatg
ggtggtgtagaagcggccgaagcactaaatatcattattcaccgcatcagagacatagaa
atggccatcgagttttgcaaggagcacgatgacaacgatctttggaatgcacttattaat
gaatttagcaatcatcctgaaatcgtgacgaaagttttggacggcatagttgactacttt
agcccagcggtggttgttggaaagataaaaatgggacagaacattccaaacctacgacaa
tcacttattaaaatgctgtggcactacaatcttcaaggtgaaattttatcctctgcccaa
caaattcaacttaatgactattttgaaattcactcggagatagtcaccacgcaaagacga
ggtcagcaggtttccaacgaacaaatgtgctcattgtgccaccgtccagtactgatgcta
cgtggcggcatgagttgggcccttgatttagatgactttcgtggactttgcggttgcggc
aagcacccattacttaggactcttaatcaggagctgctaggcatttctggacaaaaagct
aaggactgcacttaa
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