Drosophila sechellia: 6620589
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Entry
6620589 CDS
T01064
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
dse
Drosophila sechellia
Pathway
dse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6620589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dse03019
]
6620589
Messenger RNA biogenesis [BR:
dse03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
6620589
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
6620589
NCBI-ProteinID:
XP_032581084
LinkDB
All DBs
Position
X:complement(22041273..22045737)
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AA seq
765 aa
AA seq
DB search
MSNFIRKKDNVRIIIPVTFLFKCVDGAVLSGLDVNNIVLLIDDKEWGMERLVRAQQVVEL
RPYDIESWSVMIREAQTRPIHEVRSLYESLVNVFPTTARYWKLYIEMEMRCRYYERVEKL
FQRCLVKILNIDLWKLYLTYVKETKSGLSTHKEKMAQAYDFALEKIGMDLHSFSIWQDYI
YFLRGVEAVGNYAENQKITAVRRVYQKAVVTPIVGIEQLWKDYIAFEQNINPIISEKMSL
ERSKDYMNARRVAKELEYHTKGLNRNLPAVPPTLTKEEVKQVELWKRFITYEKSNPLRTE
DTALVTRRVMFATEQCLLVLTHHPAVWHQASQFLDTSARVLTEKGDVQAAKIFADECANI
LERSINGVLNRNALLYFAYADFEEGRLKYEKVHSMYNKLLQLPDIDPTLVYVQYMKFARR
AEGIKSARSIFKKAREDVRSRYHIFVAAALMEYYCSKDKEIAFRIFELGLKRFGGSPEYV
MCYIDYLSHLNEDNNTRVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGDLSSIVKVERR
RSPVFENLKEYEGKETAQLVDRYKFLDLYPCTSTELKSIGYAENVGIILNKVGGGAQSQN
TGEVETDSEATPPLPRPDFSQMIPFKPRPCAHPGAHPLAGGVFPQPPALAALCATLPPPN
SFRGPFVSVELLFDIFMRLNLPDSAPQPNGDNELSPKIFDLAKSVHWIVDTSTYTGVQHS
VTAIPPRRRRLLPGGDDSDDELQTAVPPSHDIYRLRQLKRFAKSN
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactttataagaaaaaaggataacgttaggattattatacccgttacttttttg
tttaaatgtgtggacggagcagttttaagcggtttggatgttaacaacatagttttactt
atcgatgacaaggaatggggcatggagcgcctggtgcgagctcagcaagtggtggagctg
cggccctatgacatcgagtcctggagtgtcatgatccgcgaggcccaaacgcggccaatc
cacgaagtacgcagcctttacgagtcgctagttaatgtgttcccgacaaccgctcggtac
tggaagctatacattgagatggagatgcgctgccggtactacgaacgcgtagagaaactt
ttccaacgctgcctagtcaagattttaaacatcgacctatggaagctctatcttacctac
gtgaaggaaaccaagtcgggtctaagcactcacaaagaaaaaatggcccaggcttatgat
tttgcactggagaaaatcggcatggatctacactcgttcagcatctggcaggattacata
tactttctgcggggcgttgaagcagtgggcaactatgctgagaaccagaagatcacagca
gtgcgccgcgtatatcaaaaggcggtagtcacacctatcgtgggcatcgagcagttgtgg
aaggactatatcgcattcgagcaaaacataaaccctattatatcagagaagatgagtctg
gagcgatctaaggattacatgaacgcccgtcgtgttgccaaagagttggaataccacaca
aagggtctcaatcgcaacctgccagccgtcccgcccacactcacaaaggaggaggtgaag
caagtggagctgtggaagcgctttatcacgtatgagaagtctaatccgttgcgcactgaa
gatacggccctagtcacccgtcgcgtcatgttcgccacagagcaatgtttgctggtgctc
acccaccacccggcagtgtggcaccaggcttcccaattcctggacaccagtgctcgcgtg
ctcaccgagaaaggcgacgtccaggcggccaagatttttgcggacgagtgcgctaatata
ctggagcggtctataaacggcgtgctaaaccgaaatgcgttgctatattttgcctatgcg
gactttgaagaaggacggctaaagtacgagaaggtgcactccatgtacaacaagctgtta
cagttgccagacattgatcccacattggtctatgttcagtacatgaagttcgcccgtcgt
gctgaggggatcaagtcggcccgtagcatttttaagaaagctcgagaggacgtaaggtcg
cgctatcacattttcgtggccgctgctttgatggagtactattgctccaaggacaaagaa
attgcgttccgcatcttcgagctgggattgaagcgttttggtggcagtccagagtatgtg
atgtgctacattgactacctgtcccatctaaacgaggacaataatacgcgcgtcctgttt
gaacgggtacttagttcaggtggtttgtcgccgcacaagagtgttgaggtctggaatcgc
ttcctcgagttcgagtctaatattggggatctctccagcatcgttaaggtcgaacgtcgc
cgtagtcccgttttcgagaaccttaaagagtatgagggcaaggagaccgcccagctggtt
gaccgctacaaatttctggacctttacccctgcaccagcaccgagctcaagtcaatagga
tatgctgagaatgtgggcattatactgaacaaggtgggtggtggagctcaaagccagaac
accggagaggtcgagacagatagcgaggcaacgccaccgttgccacgtccagatttctcc
cagatgattccatttaagccgcgtccatgtgctcatcctggtgcccatccacttgcaggt
ggtgtatttccgcaaccgccagctctggccgctttgtgcgccaccctgcctccaccgaac
tccttccgtggaccgttcgttagcgtagagctactgttcgatatcttcatgcgtctcaat
cttccggactccgcaccgcaaccgaatggagacaacgaattgtcgcctaagatcttcgat
ctggctaagtcggttcactggatcgtggacacaagcacgtatacgggggtgcagcacagt
gttacggccattccaccgcgccggcgacgactgctgcctgggggcgatgatagtgacgac
gagctgcagaccgctgtgccgccctcccacgatatatatcgcctgcggcagctaaagcgt
ttcgccaagtctaattaa
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