Desulfocapsa sulfexigens: UWK_00006
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Entry
UWK_00006 CDS
T02473
Name
(GenBank) soluble lytic murein transglycosylase-like protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dsf
Desulfocapsa sulfexigens
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsf01011
]
UWK_00006
Enzymes [BR:
dsf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
UWK_00006
Peptidoglycan biosynthesis and degradation proteins [BR:
dsf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
UWK_00006
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AGF76595
UniProt:
M1P9Y1
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Position
8349..10070
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AA seq
573 aa
AA seq
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MLRLSYYVSEPFFLIAIILLLSSCGKQNTAVLYPLPIDEIASPVSSLSNDPELLLVEAEP
EQCLTEELELLKRTGTWRPNIQKQFVDLPTKEVTYDFPIVLNKQVEAYLDIFQNRHKKTF
RKWLVRSGKYLPLFQKELRDAGLPEDLAYLAMIESGFNQRAYSRAKAVGLWQFMQGTAKD
YNLTVDRYVDDRRHAEKSTKAAVAFLSDLYAEFEDWHLTVAAYNAGGGKIRRGLELHKTD
NFWDLAQHKYLHLETKRYVPKLIAAIIIAKNPEQYGFSNIKYETAMEYETLRVGPGLSLD
AVALISESSSTKIKQLNQELKTGKTPLNQSHYDVQIPPGTGKLAEANLPRLNSFVSTGFK
THVIRKGDSLSAICRRYNINKTTLLKINNLRSNNLVAGNHLRIPYSTTHYRLLETGSNGL
LASSDLILHTIKPGETISRIADAYNVPANLIVSWNGLKSVHKIRAGQQLALYIKGADQSV
ATAAKPKSSTHVSTIHDSSSSMITLAKQSKFAVPAGSPSDREDQTISWYQVRQGDSLWAI
AKRFNLSTEQIKSWNKLKSNRIQPGIKLKIRNV
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgactttcatactacgtctctgaacccttcttccttatagctatcatcctgctt
ctcagctcctgtggaaaacagaatactgctgttctctatccacttccaattgatgaaata
gcgtctccagtcagttctctttcaaacgatccggaactcctacttgtcgaagcagaaccg
gaacagtgtcttaccgaagagctcgaactcctgaaacgcacaggaacatggcgacctaat
atacaaaagcagtttgtcgacttacccacaaaagaagtaacgtatgattttcccatcgtt
ctcaacaaacaagtggaagcatatctggatatttttcaaaatcggcataaaaaaacattt
cgcaagtggcttgtccgttcaggtaagtatcttcctctgttccaaaaagaactgcgtgat
gccggactccctgaagacctggcctaccttgcaatgatcgaaagtggttttaaccagaga
gcatactcccgcgccaaagccgtagggctctggcagtttatgcaaggtaccgctaaagac
tacaatttaacagtagatcgatatgtggacgatcgtcgtcatgccgaaaaatcgacaaaa
gctgcagttgcctttctctcagacctttatgcagaatttgaagactggcacctaacggtt
gctgcttacaacgcaggtggaggaaaaatcagaagaggtctggaacttcacaaaacagat
aacttctgggaccttgcccagcataagtatctgcacctggaaaccaaacgctatgttcca
aaacttatagcggccatcattattgccaaaaatcctgagcagtatggttttagcaatatt
aaatatgaaacagcaatggaatacgaaactctgcgcgtaggacctggcctcagcctggat
gctgtcgctctgatttccgaaagcagcagtacaaagatcaaacagctgaaccaggaactg
aaaacaggaaagaccccactgaaccagagtcattatgatgtccagattcctcccggaaca
ggaaagctggcagaggccaatctgccccgcctgaacagctttgtaagcactggctttaaa
acacacgtgattcgtaagggagacagcctttcagcgatctgcagacgctacaacattaac
aagacaactctactgaaaatcaacaatttgagaagcaataacctggtggctggaaaccac
ctccgaataccatacagcaccactcattatcgtctccttgaaacaggcagcaatggactg
ctcgcatccagtgatctgattctccataccattaaacctggtgaaaccatttccagaata
gcagatgcgtacaatgtaccggctaaccttattgtcagctggaacggactgaagagtgtc
cataaaatcagagcaggacagcaattagcactttacataaagggagcagatcagtctgtt
gcaacagctgcaaagccaaagagttcaacacacgtttccaccatacatgacagcagttct
tcgatgattacccttgctaaacagagtaaatttgctgtacccgctggatctccaagtgat
cgagaagatcagacgatcagttggtaccaggttcgtcaaggagattctctctgggccatc
gctaaaagattcaatctctccactgagcagatcaagtcatggaataaactcaaatctaac
cgtatccagccaggtataaaactgaaaatcagaaatgtctga
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