Desulfocapsa sulfexigens: UWK_00013
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Entry
UWK_00013 CDS
T02473
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dsf
Desulfocapsa sulfexigens
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsf03016
]
UWK_00013
Enzymes [BR:
dsf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UWK_00013
Transfer RNA biogenesis [BR:
dsf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UWK_00013
Prokaryotic type
UWK_00013
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUF
Motif
Other DBs
NCBI-ProteinID:
AGF76602
UniProt:
M1P4I1
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All DBs
Position
complement(16018..16758)
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AA seq
246 aa
AA seq
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MDIDFEAGTFLVDKPQGASSFYIVRKVRKALGMKKVGHAGTLDPFATGLLVVCAGRSATK
MIGQIMEGDKEYITTLRLGVETSTLDPEGEVTATHSVGSLSENVIEKCLEQFRGEQLQIP
PIYSALKHKGKPLYYYARKGIAVEKPPRSVTIHTLERIDGGLEVSDDSPYLTLRVVCTKG
TYIRTLGADIGKILGCGAYLTTLRRMRSGCFHVRDSIAGEDLLKEDAKIRLMNKVLSVSD
VCNLLQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggatattgattttgaagctggaacttttctggtagacaaaccccagggagcaagctcc
ttttatattgttcgtaaagtgcgaaaggcactgggtatgaagaaggttggtcatgccgga
acccttgatccgtttgccactggattgctggttgtctgtgctgggcgttctgcaacaaaa
atgatcgggcagattatggaaggtgataaggaatatattaccacccttcgtcttggagtt
gaaacaagcactttggatcctgagggggaggtcacagccacacattcagtaggatcactt
tctgaaaatgtgatcgagaagtgcctggagcagtttcgcggagaacagctgcagatcccg
cccatttattctgccttgaaacataaggggaaacctctctattactatgcgcgtaagggt
atagctgtggaaaaaccaccacgcagtgtaactatccatacgcttgagcgcattgatggc
gggctggaagtgagtgatgactctccttatcttactctcagggttgtttgcactaaggga
acatatatccggactcttggggcggatatcggaaagatcctgggttgtggagcctatttg
acaactctgagacgtatgcgaagtgggtgctttcatgtccgtgacagcattgccggagaa
gatcttctcaaggaagatgcaaagataaggcttatgaataaggtcttatctgtctccgat
gtctgtaatctgttgcaataa
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