Desulfocapsa sulfexigens: UWK_00017
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Entry
UWK_00017 CDS
T02473
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
dsf
Desulfocapsa sulfexigens
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsf03021
]
UWK_00017
03009 Ribosome biogenesis [BR:
dsf03009
]
UWK_00017
Transcription machinery [BR:
dsf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
UWK_00017
Ribosome biogenesis [BR:
dsf03009
]
Prokaryotic type
rRNA transcription factors
UWK_00017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
HHH_5
KH_1
KH_NusA_C
KH_2
HHH_2
fvmX3
DnaB_2
ParE_toxin
Phage_Gp19
Motif
Other DBs
NCBI-ProteinID:
AGF76606
UniProt:
M1PJD4
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All DBs
Position
complement(21251..22669)
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AA seq
472 aa
AA seq
DB search
MLSDLKRIIDQICRDRGFDKKLLIEAIEEAVESAAKKKLGSRRDIEVRFNEEFGEVEVFQ
FRTVVNEVEDEQTEIALEAARKLDPEVQLDDELGEKMENIEDLGRIAAQSAKQVIIHKMK
DAERDVIFEMFKDRKGEVVSGIVQRFERGNMIVNLGRTDAILPRDQQIPKRSFKQGDRIR
AYLDDVRQNARDSQLILSRTCNDFLAKLFTMEVPEIAEGIVEIMGVSREPGFRAKIAVSS
LETDVDPVGACVGMKGSRVQNVVQELQGERIDIVPWSPDPAKYVYNALAPAHVSMVMADE
EAKTLLVVVPNDQLSLAIGRQGQNVRLASRLLGWRIDVKSEQRYANLENPGYQTLLAIDG
IEEPLADQLLARGIFSIEKLAEAAVEDLIVIRSINEEQAQHLIDTAVRMIGEGVVTAEKP
KKPGAEKTVSVSEPGAGVDVEAAAAKTVPVSGSDSVEKEDLVVETPVENEQK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgctatcagatttaaaacgtatcattgatcaaatatgcagagatcgtggttttgacaaa
aaactactgattgaagccattgaagaagctgtggagtcggcagcaaagaagaagctcggt
tccagacgtgatatcgaagtgcgcttcaatgaggaatttggtgaagttgaggtttttcaa
tttcgtacagtggtaaacgaggttgaggatgagcagacagaaatcgctcttgaggctgct
cgaaaacttgaccctgaggttcagcttgacgatgagcttggtgagaagatggaaaacatc
gaagaccttggtcgtattgctgctcaatctgctaagcaggtcattatccataagatgaag
gatgctgaacgagatgttatctttgaaatgtttaaagatcggaagggcgaagtcgtaagt
ggcattgttcagcgttttgaacgtggcaatatgattgtcaatctgggtcgtaccgatgcc
attctaccgcgtgatcagcagattccaaaacgttcttttaaacagggcgatcgtattcgt
gcctacctcgatgatgttcgccagaatgccagagattcacagcttatcctgtcacgtacc
tgcaacgattttcttgctaagctttttacaatggaagtgccagagattgcagagggaatt
gtcgagatcatgggtgttagtcgtgaacccggttttcgggcaaagattgccgtgagttct
cttgagaccgatgttgatcctgttggtgcctgtgttgggatgaaaggatccagagtgcag
aatgttgttcaggagctgcaaggtgagcgtatcgatatcgttccctggagtcctgatcca
gcaaaatacgtgtataacgccttggcacccgcccatgtgtccatggttatggccgatgaa
gaggcaaaaactcttcttgttgtagtgcctaatgatcagctttctcttgcaattggtcgt
caagggcaaaatgtacgccttgcgtcacgccttcttggctggcgtatcgatgtgaaaagc
gaacagcgttatgcgaaccttgagaatcctggttatcagacgctccttgccatcgatgga
attgaagagcctctggctgatcagcttcttgctcgtgggattttctccatcgaaaaactt
gcagaggctgccgtcgaggatcttatcgttattcgttctataaatgaggaacaggcacag
catcttattgacacagccgtgaggatgataggtgaaggtgtggtgactgctgaaaaacct
aagaaaccgggagcggaaaaaactgtttcagtatccgaaccaggggctggggtggatgtg
gaggctgctgcagccaaaactgtaccagtttccggaagtgatagcgttgaaaaggaagat
ttggtagtggaaacgccagtagagaatgaacaaaaataa
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