Desulfocapsa sulfexigens: UWK_00395
Help
Entry
UWK_00395 CDS
T02473
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dsf
Desulfocapsa sulfexigens
Pathway
dsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UWK_00395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsf03400
]
UWK_00395
Enzymes [BR:
dsf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UWK_00395
DNA repair and recombination proteins [BR:
dsf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UWK_00395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Helicase_RecD
Viral_helicase1
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
RecD_N
DEAD
NTPase_1
PIF1
nSTAND3
T2SSE
AAA_7
NPHP3_N
AAA_16
NACHT
Rad17
AAA_5
CbiA
ResIII
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AGF76980
UniProt:
M1PB63
LinkDB
All DBs
Position
complement(467229..468908)
Genome browser
AA seq
559 aa
AA seq
DB search
MMLEKTVRLLDSQFAKFLANRSGLTGQDHEQFQDIVCRLSISLAAGDSFLPVTNIEARLI
SKSALAWEGEYEAGNKPLCLAGTRLYLRRMFDYEQTLAARIATFVADSQKLPLNELLLDT
LFGVQTDNEMDFQRLAAVQALKQNLLIISGGPGTGKTTTVVKILALLQSASAGGLKVALT
APTGKAAMRLQESIRNSVQGLSLEDSIVRNIPEKASTLHRLLVVKHFSPFFHHNAENPLL
HDVVVVDEASMVDLALMSKLVNALRPGCRLILLGDKDQLASVESGTVLADMISALPENTV
ELQRSYRFDRGIKRFAEAINEGDSLRAWHIMVGESPDNVSLLENDVAGYGGRHYSGYMEA
VISAVRVEEYRGLFEVFHSFKILCALRHGPFGVEGVNRAVEKYLSGKGYNCTTTEWYPGR
PVMVTRNEYGLDLYNGDIGLCLPDPESPEVLKVWFERTDGTLQGFLPGRLKSCETAYALT
IHKSQGAEIGEVLVVLPDRESAVVTRELLYTAVTRARDRVKVNSIRSVFDQAVAGKIQRH
SGLAARLQGENLFTTYSPY
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggagaaaacagttcgtctgctggacagtcaatttgcaaaattcctggccaat
cgatccggacttacggggcaggatcatgaacagtttcaggatattgtctgcaggctgtcg
ataagcctggctgccggggattcctttcttcctgtaacgaatattgaggcgaggcttatc
tcgaagtcagctcttgcgtgggaaggggagtatgaggctggaaacaaaccattgtgtctt
gcgggaactcgtctctatcttaggcggatgtttgactatgagcagactcttgctgccaga
attgcaacatttgttgcagattctcaaaaactccctctcaatgagctgctgcttgatacc
ctgtttggagtacaaacagataatgagatggactttcagaggcttgcagccgttcaggcc
ttaaagcagaatcttctgattatttcaggagggccgggaacgggaaagaccaccaccgtg
gtgaagattcttgccctgcttcagagcgcgtccgctggcggcttgaaggttgctcttact
gctcctacgggaaaggctgccatgcgacttcaggaatccatacggaattcagttcagggc
cttagtcttgaagactccattgtaagaaacatcccggaaaaggcttctactctgcaccgg
ctcctggtggtaaaacatttttcaccattttttcatcacaatgcagaaaacccattactt
cacgatgtggtggtggttgatgaagcctccatggtggatctggcccttatgagcaaactg
gtcaatgctcttcgtccggggtgtcgcctgattcttcttggagacaaggatcaactcgcc
tccgtggaatctggtacggtgcttgccgatatgatatctgccctgcccgaaaacacggtt
gaactacaacggagctatcgttttgacaggggaataaaacgctttgccgaagccatcaac
gagggggattccctgcgggcctggcacattatggttggcgagtctccagacaatgtatcc
ctgctggaaaatgatgtggcggggtacggtggcaggcactactctggctatatggaagct
gttatttctgctgtaagggttgaggagtataggggattgtttgaagtgtttcattcattc
aagatcctctgtgccctgcgtcatgggccttttggggtagaaggggtgaacagggcggtg
gaaaagtacctgagcggaaagggctacaactgtacgacaacagagtggtatcccggacga
cccgtgatggtcaccaggaatgaatatgggcttgatctctacaatggggatatcggcctt
tgccttcccgatccagagagtcctgaggttttaaaggtctggtttgaaagaacagatggc
acgttgcaggggttccttcccggcaggttgaagagttgtgagactgcctatgcactcacc
atccataagagtcagggggcggaaataggagaggtcctggtggttcttcctgaccgggaa
tcggccgttgtcaccagagagttattgtatacggcggttacccgggcacgagacagggtg
aaggtgaatagtatccgttccgtttttgatcaggccgtggccggaaaaattcaacggcat
agtggattggctgctcgtctgcagggtgaaaatctgttcaccacatactcgccgtattag
DBGET
integrated database retrieval system
