Desulfocapsa sulfexigens: UWK_00827
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Entry
UWK_00827 CDS
T02473
Name
(GenBank) hydroxymethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
dsf
Desulfocapsa sulfexigens
Pathway
dsf00730
Thiamine metabolism
dsf01100
Metabolic pathways
dsf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
UWK_00827
Enzymes [BR:
dsf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
UWK_00827
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AGF77401
UniProt:
M1PLR6
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Position
complement(953722..955584)
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AA seq
620 aa
AA seq
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MDNTEKLPNSETITRTPFASSRKIYVPGKLHDIKVAMREISVEDAAIKGPGGCGSVVTVY
DTSGPYSDPDVELDVRKGLPRLREKWIMDRGDVEQLNDLSSIFGKERLYNSDLDHLRFQD
VKKPLRARAGKNVTQLHYARQGIITPEMEYVAIRENQRIDELREEMFQHPGQSFGANTPM
THITPEFVRDEIASRRAVLPCSINHPEAEPMIIGRNFLVKINANIGNSAITSSIEEEVEK
MVWATRWGADTVMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVDGRAEELTWEIF
KDTLIEQCEQGVSYFTIHAGLRLHHVPMTAKRTTGIVSRGGSIMAKWCLAHHTESFLYTH
FEETCELLKQYDVGFSLGDGLRPGCLQDANDEAQFGELDTLGQLTQLAWKHDVQTFIEGP
GHVPMHMIKENMERQLKACGEAPFYTLGPLVTDIAPGYDHITSAIGAAMIGWYGTAMLCY
VTPKEHLGLPDREDVREGVVTFKLAAHAADLAKGHPGAQYRDNALSRARFEFRWQDQFNL
SLDPEKAVEFHDKTLPHSNAKVAHFCSMCGPKFCSMKISHEVRDYAKSLEADKQDAVATG
MKEKADEFIQSGCQLYKQGA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggataatacagaaaaacttccgaactcagaaaccattacccgaacacctttcgccagt
tcaagaaaaatctacgtcccgggaaaactccatgacattaaggttgccatgcgggagatc
agtgttgaagatgctgccattaagggccccggtggctgcggttctgtggtaacggtgtat
gacaccagtggcccctattccgatccagatgtcgagcttgacgtgcgcaaagggttgccc
aggctgcgtgaaaagtggatcatggaccgaggggacgtggagcagcttaatgatttgtct
tcaatctttggtaaggaacggctttataattcagatctggatcacctccgttttcaggat
gtgaaaaaacccctgagagccagagctggaaagaatgtcacccagctccattatgcccgt
caggggattattactccagaaatggagtatgtagccattcgtgagaatcagcgtattgat
gagctgcgggaggagatgtttcaacatccggggcagagttttggtgccaacacaccaatg
acccatataacacctgaattcgtgcgtgatgaaattgcatcgagaagggcggtgctgcct
tgcagtatcaatcatcctgaggctgagcccatgataatcgggagaaattttctggtgaag
atcaatgccaatatcggtaattccgcgattacctcatctattgaagaggaagtggaaaag
atggtatgggccacccggtggggtgctgatacggtgatggatctttccaccggtaagaac
attcatgaaacccgggagtggattctgcgcaactcacccgtacccattggcactgttcca
atttatcaggctctggagaaggttgatggcagggctgaagagctcacctgggagatcttt
aaggataccctgatcgaacagtgtgaacagggggtaagttatttcaccattcatgcagga
ctgagacttcaccatgttcccatgacagcgaaacgtaccacgggtatagtgagtcgtggc
ggcagtattatggctaaatggtgtctggcacaccacacagaaagtttcctctatacccat
ttcgaagaaacatgtgagttgctgaagcaatatgatgtcggtttttcactcggtgatggc
cttcgtcctggttgtcttcaggatgctaacgacgaggcacagtttggtgaactggacaca
ttgggtcaattgactcaactggcgtggaaacatgatgtccagacctttattgaaggccca
ggccacgttcccatgcatatgattaaagagaatatggagaggcagctgaaggcctgcggg
gaggcgcccttttatacacttggacctctggtcaccgatatcgcgcccggttacgatcat
ataaccagtgcaatcggtgctgccatgatcggttggtatggaacggcaatgctctgctat
gtgacgccaaaagagcaccttggacttcctgatcgtgaagatgtgcgtgaaggtgtggtt
acctttaaactggcagcccatgcggcggatctggcaaagggccatcctggagcacagtac
cgtgataatgcattatcccgggcacggtttgagtttcgttggcaggatcagtttaacctt
tctcttgatccagaaaaggcggtggagtttcatgacaaaaccttaccccattccaacgct
aaggtggctcatttctgctccatgtgtggccctaaattttgttccatgaagatttcccat
gaagtgcgggactacgcaaagtctttggaggcggataagcaggatgctgttgccacagga
atgaaggagaaggcagatgagtttatccagtctggttgccagctgtacaagcagggggca
tag
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