Desulfocapsa sulfexigens: UWK_01128
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Entry
UWK_01128 CDS
T02473
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
dsf
Desulfocapsa sulfexigens
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsf03400
]
UWK_01128
DNA repair and recombination proteins [BR:
dsf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UWK_01128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DnaB_C
GvpD_P-loop
SLFN-g3_helicase
AAA
DUF7125
PAXNEB
AAA_14
RecA
AAA_22
Lon_C
nSTAND3
AAA_30
AAA_24
AAA_16
KdpD
Elong_Iki1
DAP3
Rad51
AAA_18
Viral_helicase1
cobW
Zeta_toxin
NTPase_1
AAA_29
AAA_28
ABC_tran
NB-ARC
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AGF77696
UniProt:
M1PMM1
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All DBs
Position
1268230..1269594
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AA seq
454 aa
AA seq
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MAKKQETAFVCTDCGADFSRWLGQCSVCKEWNTVKEVRLGRSPAGRHSTGYSGKHSMVQL
LSEVDRSRAERISTGIAEFDRVLGQGIVCGSVVLIGGAPGAGKSTLLLQALAKGSVSGIP
VLYVSGEESPQQIAERADRLELPAGNIKMLAETSVEEICKVMNKEEPQVVVIDSIQVVHS
MSSESAPGSISQVRESAAILTRYAKETNTSIFMVGHVTKDHSLAGPMTLSHIVDAQVVLS
STDDARYRILRADKNRFGSVGELGFFAMTDRGLKEVKNPSAMFLSRSGTPASGSAVTVVW
EGTRPLLVEIQALVTECQSGNPRRLAVGMDQNRIAMLLAVLAKHGGLATASDEVYVNVVG
GIRVYETSSDLAAMVGIVSSLQDRVIPHDSLFFGEIGLSGEIRPVANGEARLKEAAKHGF
RRAVIPKANAPRQPVKSLEIVAVGSLVEALEALY
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaacaggaaacagcatttgtctgtaccgattgtggtgcagatttcagccgc
tggttaggacagtgcagcgtttgtaaggagtggaacaccgtcaaagaagtccgtttggga
aggagtcctgcaggcaggcactccaccggttatagtggtaagcactccatggtgcaatta
ctctctgaagtggatagaagtcgggcagagaggatttcaaccggaattgccgaatttgac
cgggtcctgggacaggggattgtgtgcggatctgttgtgcttatcggcggggcgccgggg
gctggcaagtcaactcttcttcttcaggcgctggcaaaaggttcggtatccgggattccg
gtactctacgtatccggtgaagaatctccgcagcagattgccgaacgggccgatcggctg
gaacttccagctggcaatatcaagatgctggctgagacatccgttgaagaaatctgcaaa
gtgatgaataaagaagagccccaggtggttgtgattgactctatccaggtcgtgcattca
atgtcttccgaatcggccccggggtcaatctcccaggtgcgggaatccgcggcaattctc
acccgttatgctaaagaaaccaacacttccatttttatggtcggccatgtgacgaaggat
cattctctcgcaggccccatgaccctgagtcacattgtggatgctcaggtggtgctctca
tccactgatgatgccaggtatcgtattttgcgggccgacaaaaaccgttttggcagtgtg
ggggaacttggtttctttgccatgaccgacaggggcttgaaggaagttaagaatccctct
gccatgtttctgtcacgatcaggtactccggcatccggtagtgcggtaaccgttgtatgg
gagggaaccagaccattgcttgtggaaattcaggccctggttactgaatgccagtcaggc
aatccaagacgtctggcagtggggatggatcaaaacaggattgccatgcttctggcagtg
cttgccaagcatggggggctcgccacggccagtgacgaagtatacgtaaacgtggtgggg
ggaattcgggtatacgagacaagttctgatcttgccgcaatggtgggcatagtttccagt
ttgcaggacagggttattcctcatgattccctcttttttggagaaatagggctttccggt
gagattcgaccggtggccaatggtgaagcaagattgaaagaggctgccaaacatggattt
cgtcgggcggtgatccccaaggccaatgctccgcggcagccggtgaagagtcttgaaatt
gttgctgtggggagtctggttgaagctctggaagccctgtactag
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