Desulfocapsa sulfexigens: UWK_01245
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Entry
UWK_01245 CDS
T02473
Name
(GenBank) apurinic endonuclease APN1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dsf
Desulfocapsa sulfexigens
Pathway
dsf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UWK_01245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsf03400
]
UWK_01245
Enzymes [BR:
dsf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
UWK_01245
DNA repair and recombination proteins [BR:
dsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
UWK_01245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AGF77810
UniProt:
M1PDK5
LinkDB
All DBs
Position
complement(1401349..1402215)
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AA seq
288 aa
AA seq
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MPLLGAHESVAGGVHLAFDRIRAVGGSALQIFTRNQRQWTPKPVTEEEQQLFAAAWEECP
DMPVASHASYLVNLASGKPDLAQKSIIAFSDELKRCEVLNIPLVVMHPGSHGGDGVDTGI
ARFIKNLDLAFERADNQVTVLLETTAGQGTGLGSRFEELGAIIEGSKYRNKLGVCMDTCH
IFAAGYDIRSPKSYQACMAEFDKFVGIEQIRFFHLNDSKKSLGCNVDRHEHIGQGEIGLD
GFRNLLNDPRFADHPMTLETPKGKDLQEDRDNLAVLRGLLSHRDNIQL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccattacttggagcccatgaatcagtagcaggcggagtacaccttgcttttgatcga
atacgtgcggtgggcggatctgccctgcagatcttcacccgtaaccagcgccagtggacc
cccaagccggtgacggaagaggaacaacaactttttgccgctgcctgggaggaatgtcca
gacatgcccgttgcctcccatgcctcctacctggtgaatctggcctcgggaaaacccgat
cttgcccaaaaatccatcatagccttttcagatgaactgaaacgctgcgaggtactgaac
atccctctggttgttatgcatcccggatcccatggtggtgacggggtggataccggtatc
gccaggtttataaaaaatcttgatctggccttcgaacgtgccgacaatcaggtaacggtc
ctcctggaaaccaccgctggtcagggcacaggcctggggagtcgttttgaagaattaggg
gcgatcatcgaaggctcgaaatacaggaacaaactcggggtctgcatggatacctgtcac
atatttgctgccggatatgatattcgcagcccgaaaagctaccaggcatgtatggctgaa
tttgacaaatttgtaggaatagaacagatccgtttttttcatctcaacgactcaaaaaag
agccttggctgtaacgtggaccgccacgaacacattggtcagggcgaaattggcctcgat
ggatttcgtaaccttctaaacgatcctcgctttgcagaccacccaatgacacttgaaaca
ccgaagggaaaagatctgcaggaggatcgggacaatctcgctgtcttacggggacttctt
tcccatagggacaatattcagctatag
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