Desulfocapsa sulfexigens: UWK_01854
Help
Entry
UWK_01854 CDS
T02473
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
dsf
Desulfocapsa sulfexigens
Pathway
dsf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
UWK_01854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsf03021
]
UWK_01854
Transcription machinery [BR:
dsf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UWK_01854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
RNase_3_N
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
AGF78411
UniProt:
M1PPU2
LinkDB
All DBs
Position
complement(2083016..2084146)
Genome browser
AA seq
376 aa
AA seq
DB search
MTHIADDTLSETASTELLQPTYHTAHDRQPPSLVAQQLQSERLLSHEDEIKHTKAIRDNF
CAIVQSVKKIHTSSPKITQLQKTVQAWEKKDNPIKPGKRRLDHIIATLESTCDGSSDDDG
THYLCEQFKILAHEIEEAKNIIITANLRLVCSIAKRYTDRGLSLADLIQEGCIGLMRAVF
RFDHNTGRRFSTYASWWIRQAITRAIPEKTRTIKLPAHFLVSRNHFNKTFSGLRKQLGRK
PTMLELSQNTYMDHDKILSIIETSMDPVSLEEPVGDNSQNLMSLLANDKACLPDDIAITS
DLRKQIDSILDTLSSREAQVLRLRFGLDGRCECTLDEVGKQFNVSRERIRQIEQEALKRL
RHPARSDHMRCFLENN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacacatatagctgacgacactctctccgagacagcatcgaccgagctcctgcaaccc
acctaccacactgcgcacgacaggcaaccaccgtccctggtggcccagcagctccaatcc
gaacgactcctcagccacgaggacgaaatcaaacatacaaaagcaatcagggataatttt
tgcgccattgtccagagcgtcaaaaaaatccacacctcatctcctaaaataacccaactt
caaaaaactgtgcaggcatgggagaaaaaagacaacccaatcaagccaggcaaacgtcga
ctcgaccacataatagccactcttgaatccacctgcgacggctcttcggacgatgacggc
acccattacctctgtgagcagttcaaaatactggcccatgaaatcgaagaagcaaaaaat
atcattataaccgccaacctgcgccttgtctgctccattgccaaaagatacacggacaga
ggattaagcctggccgatcttatccaggaaggatgtattggcttaatgcgtgcagttttc
cgttttgaccataataccggaagaagattttcaacctatgcctcatggtggatacgacag
gcaatcaccagagcaataccggaaaaaaccagaaccataaaacttcctgcccattttctt
gtctcacgcaaccacttcaacaaaacattcagtggattacgcaaacaactcggaagaaaa
cccacaatgctggagttgagccaaaacacctatatggatcatgacaaaatactttccatc
atagagaccagcatggatcccgtatcacttgaagaaccagttggagataacagtcaaaac
ctgatgagccttctcgcaaacgacaaggcctgtctgcctgacgatattgccataacctca
gaccttcgcaaacagatagacagcattcttgacacattaagcagcagagaagctcaggta
cttcgccttcgttttggacttgatggaaggtgcgaatgcaccctggatgaggtgggcaaa
caattcaacgtctcacgggaacgcattcgccagatcgagcaggaggcattaaaacgcctc
agacacccggcgcgcagtgaccatatgcgctgcttccttgaaaacaattaa
DBGET
integrated database retrieval system
