Desulfocapsa sulfexigens: UWK_02522
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Entry
UWK_02522 CDS
T02473
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dsf
Desulfocapsa sulfexigens
Pathway
dsf03030
DNA replication
dsf03430
Mismatch repair
dsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UWK_02522
03430 Mismatch repair
UWK_02522
03440 Homologous recombination
UWK_02522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsf03032
]
UWK_02522
03400 DNA repair and recombination proteins [BR:
dsf03400
]
UWK_02522
Enzymes [BR:
dsf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UWK_02522
DNA replication proteins [BR:
dsf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UWK_02522
DNA repair and recombination proteins [BR:
dsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UWK_02522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AGF79058
UniProt:
M1P6I9
LinkDB
All DBs
Position
complement(2809558..2813073)
Genome browser
AA seq
1171 aa
AA seq
DB search
MSAGFAHLHVHTQYSLLDGAIRVPDLLAKCKKYGMESVAMTDHGAMYGALEFYLKAKAKG
IKPIVGCEFYIAPGHRTERNASAPTKAYHIVLLAMNYQGYQNLMKLSGIAQFEGFYSRPR
IDMEVLESHSDGLICLSACLHGEVPWLVVHKGLDAAREKARQFQDIFGDRFYLELQENSI
PEQKTANHGLITISKELGIKLVATNDCHYLNREDAHAHEVLLCIQTGKTINDPKHFSFSS
DTFYFKTPEEMQDSFRDHPEALANTIEVADRCNLEIDLEGYHFPEFPVPEGETLETMFID
ACRDGLKDRFAAMREAGTFSKEVKEQYTARLEYEIGIINSMGFPGYFLIVADFINWAIDH
QIPVGPGRGSGAGSLAAYAMRITNIDPIPYGLIFERFLNPERISMPDFDIDFCQDRRGEV
IDYVRQKYGGAPNVAQIITFGSMKAKGVIRDVGRALDIPFNEVDKIAKLVPDALKMTIDK
AIDEEPRLADAANKDPRIAELIKVAQTLEGLARHTSTHAAGVVVSPKPMVEYLPTCKGKE
GETLTQYDMKHTEMTGLIKFDFLGLKTLTVIDYALKHIKADIGTDLDINALPMDDIKTFE
LLCSGDALGVFQLESSGMRELLVKMAPAQFSDLIALVALYRPGPLDSGMVDDFVETKHGR
ATANYPLPQLKPVLEETYGVIVYQEQVMKIANILANYSLGDADILRRAMGKKKVEVMNEE
KIKFMEGAKKNNVDEKKAEYVFDLMAKFAGYGFNKSHSAAYALISYQTAYLKAHYPAQFM
AALLSCDMNNTDKVVSYINECREHSIEVMPPDINESLIDFSVHNDRVRFGLAAVKNVGKS
ALHSIIEEREAGGKYTSLEDFCNRVDSRKVNSRVIESLIKSGSFDSVGCRRSQLMAIVDQ
AMDKAKAVQRDKQSGQMSLFGLSPATDTTDKSGIILPDIPEWEERERLTMEKETVGFYIT
GHPLDEDIAEIKTITDTDIAGLAEYSEDQPVRIGGLIRSCKQLKSKKGDLMAFITIEDLL
NAVEVIVFPNTFAECYPLLSSTETIIVQGTVQIDERGPKIIAESLELLPQAREKHTESIK
IKLNSEKISRKRLESLKQVLYRYHGNCPLLLTMHFPGQGEVDIEILKDLTVRPCREFTDE
TEKILGYKALSYRKKTLISHKQKRWGQAKAS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccggattcgcccacctccacgtccacacccaatacagtctcctcgacggcgct
attcgcgttccagatctccttgccaagtgtaagaagtatggaatggaatccgtcgcaatg
accgaccatggtgccatgtacggggcgctggaattttacctgaaggcaaaggccaaagga
ataaaacccatcgtcgggtgtgaattttatattgcacccggccaccgaacagagcgtaat
gcctctgctcctaccaaagcctatcatatagttctgctggccatgaattaccagggctac
cagaacctaatgaaactctccggaattgcgcagtttgagggattctactccagacccaga
attgatatggaggtacttgaatcccacagtgatggtttaatctgcctcagcgcctgtctt
catggagaagttccctggcttgtcgttcacaaaggtcttgatgctgccagagaaaaagcg
agacaattccaggatattttcggagacagattctacctggaacttcaggagaactcaatt
cctgaacagaagaccgccaatcatggtcttattacaatatccaaagaactcggaatcaaa
ctcgttgccaccaacgattgtcactacctgaatcgggaagatgcccacgcccatgaagtc
ctgctctgtattcagaccggcaaaaccattaatgacccaaaacatttcagcttttcctca
gacaccttctactttaaaactccagaggagatgcaggacagcttcagggatcaccccgag
gcacttgcaaacaccattgaagtagccgatcgctgtaatcttgaaattgatcttgagggg
tatcatttcccagaatttcccgtgcccgaaggtgagacccttgaaacaatgtttattgat
gcatgtcgggatggccttaaggatcgctttgctgcaatgcgggaagcaggaaccttcagc
aaagaggtgaaagaacaatatacggcgcgtcttgagtatgaaatcggcatcatcaattcc
atgggttttcccggatatttccttattgttgctgactttattaactgggccatagaccat
caaattcccgttggaccgggtcgtggatccggagccggcagtctggcagcctatgccatg
cgtatcactaatattgacccgattccctacggtcttattttcgagagatttctcaatcct
gaacgaatcagtatgcctgactttgatattgatttctgccaggacaggcgcggtgaagtg
attgactatgtccgtcagaagtacggtggcgctcccaatgtggcccagattatcaccttt
ggctctatgaaggcaaagggcgttatccgggacgttggcagagcactggatattccattc
aatgaagtggacaaaatagcaaaactcgttcccgatgccctgaaaatgaccattgacaag
gccatcgacgaggaaccacgtcttgctgatgcagcaaacaaggatccacgcattgcggaa
cttataaaagtcgcccagacccttgaaggacttgctcgccatacatccacccatgcagcc
ggcgtggtcgtctccccaaaacccatggttgagtatctgcctacctgcaagggaaaagaa
ggagagacattaacccagtatgatatgaagcatactgaaatgaccgggctcatcaaattc
gatttccttggactcaaaaccctcaccgtaattgactacgctttaaaacacatcaaagcg
gacattggtactgaccttgacatcaacgctctgcccatggatgatatcaagacctttgaa
ctactctgctcgggagacgccctaggtgtctttcagcttgaaagttcagggatgcgtgaa
ctactggtaaagatggcacctgcacagttcagcgatctcattgcacttgttgctctctat
cgtccgggacctctcgactccggtatggttgatgattttgttgagaccaaacatggccgg
gccactgccaattacccgctgccacagctcaagcccgttcttgaagagacctacggcgtt
attgtctaccaggaacaggttatgaaaattgccaacattctggcaaattacagcctgggt
gatgccgatattttacggcgggccatggggaaaaagaaagtcgaggtcatgaatgaagaa
aaaatcaaattcatggagggtgccaagaaaaacaatgttgatgaaaaaaaggctgagtat
gtttttgacctgatggcaaaatttgcgggatacggctttaacaaatcccattctgctgcc
tacgcccttatttcataccagaccgcctacctcaaagcccattatcctgcccagtttatg
gccgccctcctctcctgcgacatgaacaatacggataaggttgtttcgtatatcaatgag
tgcagagagcattccattgaagtgatgcctcctgacatcaatgaatcacttatcgatttc
tcggtacataacgacagggtccgttttggacttgccgctgtaaagaatgtcgggaagtct
gccctccactcaatcattgaggaacgggaagctggtggaaaatacacatcccttgaagac
ttctgtaaccgtgttgattcaagaaaagtaaactcacgagtcatcgaaagtcttatcaaa
tcaggttcatttgattcggtgggctgcaggcgttctcaactcatggccattgttgaccag
gccatggacaaagcaaaggctgtacaacgtgacaaacaaagcggtcagatgtctcttttt
ggcctgtctcctgcaacggacacaacggacaaaagcggaattatccttcctgatattcct
gagtgggaagaacgggagcgcctcaccatggaaaaggaaactgttggtttctatattacc
ggccacccgcttgatgaggatattgcagagattaaaaccatcaccgacactgacattgct
ggtcttgctgaatatagtgaagatcagccggtaaggattggcggactaatccgcagctgt
aagcagctgaaaagtaagaaaggcgatcttatggcctttattaccattgaagatcttcta
aatgctgtggaggttatcgtctttccaaatacttttgcagaatgttaccccctgctctcg
tccactgaaacgataattgttcagggaaccgtgcaaatcgatgaacgagggccaaagatt
attgccgaatcccttgaattgctgccccaggccagagaaaagcatacggagtcaataaaa
atcaagcttaacagtgaaaagatcagccggaaacgtctggaatccctgaaacaggtgtta
taccgctaccacggtaactgccccctgcttcttaccatgcattttcccggccagggagag
gtcgatattgaaattttgaaggatttgacagtaagaccatgccgcgaattcacggatgaa
accgaaaaaattcttggatacaaagcgctgtcatacagaaaaaaaacgcttatcagtcac
aaacaaaaacgctggggccaggcaaaagcctcctaa
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