Desulfocapsa sulfexigens: UWK_02734
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Entry
UWK_02734 CDS
T02473
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
dsf
Desulfocapsa sulfexigens
Pathway
dsf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
UWK_02734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsf03021
]
UWK_02734
Transcription machinery [BR:
dsf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UWK_02734
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGF79269
UniProt:
M1NI61
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All DBs
Position
3047743..3049077
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AA seq
444 aa
AA seq
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MQAELKENLLKAGKEEGCISFTELNKLLPEEIKDPAAIEKVFNFLGAHSIEIVTQDGKDG
EKRTLSGEVWSIPDGSDDSDFEDDPATSSPEDDAHDGEETTTTYLREMGRFDLLTPDEEA
KYSRTIRQGFESIIEAIRIDQSGVKDLELLRTRIALWEKRDPTLKPKKQQLNFMRYSVVS
AAKKHSDCRELIELQTRLEAYSRSIEIAKDCMIRANLRLVVSIAKRYMHQGLTLADLIQE
GNLGLMRAVFRFDYTKGNKFSTYASWWIRQAITRAILDKTRTIRLPVHFLELRSQFFKAF
YALYKELGREPTPLEISKNTDLPMDKILAILEASREPISLETPVGDDDSTLGDFLENQES
QSPYEAVQNRELSGRVEEILSTLSEREEKIIRLRFGIGEKAEYTLEEIGKRFNVSRERIR
QIEKKALNRLRHSSRRDKLKFFLD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggccgaacttaaagaaaatctcctcaaggcaggaaaagaagaggggtgtatcagc
tttactgagttgaacaaactcctccctgaagaaatcaaagatcctgcagccattgagaaa
gtattcaattttcttggtgctcatagtattgaaattgtgacccaggatggtaaggatggt
gaaaaaaggactctatccggtgaggtctggagcattccagatggatccgatgatagcgac
ttcgaagatgatccagccacatcctccccggaagatgatgcccatgacggagaagaaacc
accacaacctatttgcgggaaatggggcgttttgatcttctgactcctgatgaagaggcc
aaatattcaagaaccatcaggcaggggtttgagtcaataatagaagcaattcgaattgac
cagtccggtgttaaggatcttgaacttcttcgtacccggatagctctgtgggaaaaaaga
gatcccaccctcaagccaaaaaaacagcaactcaacttcatgcgctacagtgttgtcagt
gctgccaaaaaacactctgattgccgtgaattgattgagttgcaaaccagacttgaagcc
tattcccgttctattgaaattgccaaggattgtatgattcgtgcgaatcttcgtctggtg
gtttcaattgcaaaacggtatatgcatcagggccttactcttgctgatcttattcaagaa
ggaaatcttgggctcatgcgagctgttttccgttttgattatactaagggaaacaaattc
tccacatacgcatcctggtggattcgtcaggccattacccgggctattcttgataaaacc
agaactatccgcctccctgttcatttccttgagctgagaagtcagtttttcaaagccttt
tatgctctctataaagagctgggtagagaaccgacaccgctggaaatatccaagaataca
gaccttccaatggataaaatcctcgccattcttgaggcctcaagagaaccaatttctctc
gaaacccctgtcggtgacgatgattccacccttggggattttcttgaaaaccaggaatct
caatccccctatgaggccgttcaaaaccgtgaactttcaggacgggtggaggaaatactc
tctactttaagtgagcgtgaagaaaaaatcatccgtctgcgttttggtatcggtgaaaag
gccgaatacacactcgaagagatcggcaaacggttcaatgtctctcgtgagcggattcga
cagattgaaaagaaggcattaaatcgcctgagacattcgagtcgtcgtgataaattaaaa
ttctttttggattaa
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