Desulfocapsa sulfexigens: UWK_02882
Help
Entry
UWK_02882 CDS
T02473
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dsf
Desulfocapsa sulfexigens
Pathway
dsf03410
Base excision repair
dsf03430
Mismatch repair
dsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UWK_02882
03430 Mismatch repair
UWK_02882
03440 Homologous recombination
UWK_02882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsf03400
]
UWK_02882
DNA repair and recombination proteins [BR:
dsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
UWK_02882
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UWK_02882
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
UWK_02882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PIGA
Motif
Other DBs
NCBI-ProteinID:
AGF79413
UniProt:
M1P7H0
LinkDB
All DBs
Position
complement(3212529..3214274)
Genome browser
AA seq
581 aa
AA seq
DB search
MSVEQGQKRIRLSDGKYLNPFIEKLLARRGICGKDEIQQFLEPKLKELPSPFLLKDMDLA
VNLIEETITNGHPILVWGDYDVDGTTATALLLLFFKSIGYTADYHIPNRLTDGYGIQKDG
LRKVSENRDTDKCLLITVDNGISAHEAVEYAKKLGYKVIITDHHLALPERVMADAVINPN
QTNCEFLDKTLAGVGVAFYLAMATRTHLLKCGYFDTINKPPNLKQFLDLVAIGTIADMVP
LKKINRIMVKAGMETIGDQKNHGITALCHLNNLDPKCIRSEDVSFQLAPKINAAGRMGEA
DKAIKLFLSLNKKEAFAIAKDLVESNDKRKLINIKDFISAKDNLLRQGTNTKHSIIVAGN
YHVGVAGIVASNLVEEYQKPSVVLCDLGEGVLKGSARSVVGIDIFKALDNCREVLLGFGG
HEMAGGMSLLKGNLMNFKKLFDESIQKQSNRTPENSDNQIDDDIEINDLFNGEILRQLHL
MEPFGTDNPQPIFRDRSTEFLKVLPLGRDKSHLRFNFRGERHTIEGVGFGMGKLIEHCRL
SKERDILYTPSINFFKGKRSWQVRVTKIVFNNDNIPDSQHN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgagcaaggacagaaacgaattagactttcagacggtaaatacctgaatcct
ttcatcgaaaaactgcttgcaagaagagggatctgcggaaaagatgagattcaacaattt
cttgaaccaaagctcaaagaattgccaagtccatttttattgaaagatatggatctggcg
gtgaaccttattgaggagaccataaccaacggtcaccccatattggtttggggtgattac
gatgttgatgggaccacggccacagcgctccttcttttatttttcaaatcgattggttac
accgccgattatcacatccccaatcgattgacagatggttacggcatacaaaaagatggc
ctgagaaaggtatcggagaacagagataccgacaaatgcctactgataactgtagataat
ggaatatctgcacacgaggctgtggagtatgccaaaaaactgggctataaagtcattata
acagatcaccaccttgctctgccagaaagggtaatggcagacgcagtgatcaatccaaac
cagacgaactgtgaattcctggataaaacactggctggtgtcggagtagcattttacctt
gcaatggcaacaaggacacacctgttaaaatgcggatatttcgatactatcaacaaacca
ccgaacttaaagcaatttctagaccttgtcgccattggaacaattgcagatatggttcct
ttaaaaaaaattaacaggattatggttaaagcagggatggaaaccattggcgaccagaaa
aaccatggcataaccgcgttgtgccaccttaacaacctggatcctaagtgcattcgatct
gaagatgtttcgtttcaactggctccaaagattaatgctgccgggagaatgggggaggcg
gacaaggccataaaactttttttgtcattgaataaaaaagaggcttttgcaatcgccaag
gaccttgtcgagagcaacgataaacgtaaactcataaacatcaaggactttattagtgca
aaggataaccttttgcgccagggcacaaataccaaacattccattatagttgctggaaat
taccatgttggagttgctggcattgtggcatctaatcttgttgaagaataccaaaaaccc
agtgtggttctctgcgatcttggcgaaggagttttaaaaggttcagcgaggtccgttgtt
ggtatagatatcttcaaggccctggataattgcagagaggttcttcttggttttggtggt
catgaaatggctggcggaatgagcttgttaaagggaaatttgatgaatttcaaaaaatta
ttcgatgaatccatacaaaaacaatcaaataggacgcctgagaacagcgataatcagata
gatgatgatattgagattaacgatttatttaatggtgaaattctcagacagttacattta
atggagccattcggaacagacaatcctcagccgatttttagggaccgctcaactgaattc
ttaaaagtattgcctctaggaagagataagagtcacttgagatttaatttccgtggagaa
agacataccatagagggggttggcttcggaatgggaaaactaatagagcattgccgatta
tcaaaagaacgggacattctctacaccccaagtattaattttttcaaagggaagagaagt
tggcaggtaagagtgacaaaaatcgtattcaacaacgacaacatcccggactcacaacat
aattaa
DBGET
integrated database retrieval system
