Desulfocapsa sulfexigens: UWK_03095
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Entry
UWK_03095 CDS
T02473
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
dsf
Desulfocapsa sulfexigens
Pathway
dsf02020
Two-component system
dsf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UWK_03095
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
UWK_03095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsf03021
]
UWK_03095
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dsf02035
]
UWK_03095
Transcription machinery [BR:
dsf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UWK_03095
Bacterial motility proteins [BR:
dsf02035
]
Flagellar system
Flagellar assembly proteins
Stator
UWK_03095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_r2
GerE
HTH_23
UPF0122
PhyR_sigma-like
Sigma70_ECF
MarR
HTH_37
MarR_2
DUF7343
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AGF79624
UniProt:
M1NJ94
LinkDB
All DBs
Position
3437028..3437759
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AA seq
243 aa
AA seq
DB search
MVYTPHKLPEDRTTLITDHLTLVDIIAGRMVTQVPSFMNRDDIKSAGMMGLIDAANKFQP
EKNILFKTFAEYRIRGAILDEMRKLDWFSRSLREKQSSINRCMIELERELGRSPEEHEMA
NKLEISLEEYQNLLGQVSHLGCVSLNETLDHSDTGRSFQDALIDTRKGSSPVSILEQHEL
THIIAEILEQLSEKERLVVSLYYYEELTQKEIAEVLEVSEGRVSQLHSQALIKLKTKAQN
AIH
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggtttacactcctcataagcttcctgaagacaggacaaccctgataactgatcacctt
acccttgttgacatcatcgcaggacgaatggttacccaggtcccttcttttatgaatcgt
gatgacattaagagtgcgggaatgatgggacttatcgatgctgcaaataaatttcagccg
gaaaagaatatacttttcaaaacattcgccgaatatcgcattcgtggggcaatccttgat
gaaatgcgaaaacttgactggttctcacgctctcttcgagaaaaacaatccagtatcaac
agatgcatgatagaacttgaaagagaactcggccgctcccccgaggagcatgaaatggca
aataaacttgaaataagccttgaagaatatcagaacctgctcggccaggtcagtcatctc
ggttgtgtcagtctcaatgaaactctggatcattccgatacaggaagatcattccaggat
gccctgatcgatacccgtaaaggctcctcccccgtcagtatccttgaacagcatgaatta
acacatatcattgccgaaatacttgaacaactttcggaaaaagagcgtctggttgtttca
ctctactactacgaggaactcactcaaaaagagattgctgaagtcctggaagtctccgag
gggcgtgtctctcagctgcacagccaggccctcatcaaattgaagactaaggcccagaat
gccattcattag
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