Desulfocapsa sulfexigens: UWK_03453
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Entry
UWK_03453 CDS
T02473
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dsf
Desulfocapsa sulfexigens
Pathway
dsf03420
Nucleotide excision repair
dsf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UWK_03453
03430 Mismatch repair
UWK_03453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsf03400
]
UWK_03453
Enzymes [BR:
dsf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UWK_03453
DNA repair and recombination proteins [BR:
dsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UWK_03453
MMR (mismatch excision repair)
Other MMR factors
UWK_03453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
HHH_5
AAA_22
TAF
Motif
Other DBs
NCBI-ProteinID:
AGF79969
UniProt:
M1NK69
LinkDB
All DBs
Position
complement(3838945..3841140)
Genome browser
AA seq
731 aa
AA seq
DB search
MKNTIFRNLNDPLKSSVNLNELNASQREAVTSTEGPLLVIAGAGSGKTRTLVYRVAYLLE
QGIDPERILLLTFTRKASQEMLWRAGQLLNETCRRVVGGTFHGIANMLLRRHGHHLGFGS
SFTIIDRADAEGIVNLLKGSLGLTGRDKQFPTKRVLINILSGSVNKSIPIDDLVYESYSH
LSEHVDDILNLEKYYKEFKFNNGLMDYDDLLVNWKRLLDEIPEARQEMAARYSHIMVDEY
QDTNLIQADIVRLLAHGHENVMVVGDDSQSIYSFRGADFYNIMRFPKVFKETKIIKLEEN
YRSTQPILSLTNDIMTNAVEKYAKTLFTRIEGKFKPRLFAGRDEREEAAFVSKKIAELRG
QGIALNNIAVLFRSGFHSYKLEMELNSTSVDFEKRGGMKLTESAHMKDVIAFLRLRVNPF
DTLSWNRILLHLDKVGPKTARKIADTIATSGSPGQALSEYPCGKNWRHGVESLAQLFMEM
ERETTPGVLYELVWAYYQPLFEKIYRDDFPKRQKDLDQLKSIVAGYADVQTFVDDTTLDP
PETGKGLSKEDKERMILSTIHSSKGLEWDVVFVMGLADGRFPHSAAEVGEQWEEERRLLY
VAATRARKYLYLTYPRELMTPDRQFRRVGMSPFLAELRAGLFERIDSDGVERNAPSFLTS
TSTASSAITFTKKAKKTKLSVKDLSKGVRVHHPFFGEGVVNNKPQGRSVDVIFQRHGVKT
LHLDYAKLTLV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatactatctttcgcaatctgaatgatcctctgaaatcttcagtaaatcttaat
gaactcaatgcttcacaacgagaggctgtaaccagcaccgaggggccactgcttgtcatc
gccggtgccgggagtggtaaaacacgaactctggtgtacagggttgcctatctgttggaa
caggggattgatccggaaagaatactcctgctcacttttaccagaaaggcctctcaggaa
atgctctggcgtgccggccagcttctcaatgaaacctgtcgtcgcgtggttggaggaacg
tttcacggtattgccaatatgctgcttcgcagacatggacatcaccttgggttcggttct
tcctttaccataattgatcgcgctgatgctgaaggcattgttaatttgttaaaggggtct
cttggacttaccggtcgtgacaaacagtttcccaccaagagggtactgattaatatcctt
tcaggctcggtgaataaatccatccccatagacgatcttgtttacgaaagttattcccat
ctcagtgaacatgtggatgatatcctgaatctggaaaagtattataaagagtttaagttt
aataatggactcatggattacgatgatctgttggtaaactggaaacggctgctggatgaa
attcccgaggccagacaggagatggctgcaaggtattcacatatcatggtggatgagtat
caggacaccaacttgattcaggcggatattgtacgactgctcgcccacggtcatgaaaat
gtgatggtggtgggggatgactctcagtccatctactcctttcggggggcagatttctac
aatatcatgcgcttccccaaggtgtttaaggaaacaaaaattattaaactcgaagaaaac
tatcgttccactcagcccatcctgtcccttaccaatgatattatgactaatgctgttgag
aagtatgcaaagacacttttcaccagaatagaggggaaatttaagccccgactttttgcg
ggacgtgatgagcgggaggaagctgcttttgtttcgaaaaagattgcggagttacgtggg
caaggaatagcactgaacaatattgcggtactttttcgatcaggttttcattcctataag
cttgaaatggaactcaattccacaagtgttgattttgagaagcgaggtggtatgaagctt
acggagtctgcccatatgaaagatgttattgcctttctgcggctccgcgttaatcccttt
gataccctttcctggaaccgtattttgctccatcttgacaaggtcggtcccaagactgcc
cgaaaaattgctgatacaatcgcgacctctggaagccctggtcaggcgctatccgaatat
ccctgtggcaagaattggagacatggtgtcgaaagtcttgcgcaactgtttatggaaatg
gagagggagacaactcctggggttctgtacgaacttgtctgggcctattatcagccatta
tttgagaaaatatatcgtgatgattttcccaagcgtcaaaaggatcttgatcagttgaag
tccattgtcgccggctacgccgatgtgcaaactttcgttgatgatacgacacttgatcct
cctgagacagggaaaggtctctcaaaagaggataaagagcggatgattctgtcaaccatc
cactcgtcaaaaggtttggaatgggatgttgtttttgtgatggggttggccgatgggcgg
tttcctcattctgctgcagaagttggcgaacagtgggaagaagagcggagacttctctat
gtggctgcaaccagagcgaggaaatatttgtatctcacctatccgcgtgaacttatgact
cccgaccgacagttccgaagagttggaatgtcgccttttcttgctgaattacgcgctggg
ctttttgaacgaattgacagtgatggggtggagcgtaatgcaccttcttttctcacgtcc
acctcgacggcatcaagtgctattacttttactaaaaaagctaagaagacaaagctgtcg
gtgaaagacctgagtaagggcgtgcgggtgcatcatccattctttggtgaaggtgtggta
aataataaaccgcagggccgttccgtggatgttatttttcaaagacatggagtgaaaact
ctccaccttgactatgcaaaattgactctcgtttaa
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