Desulfocapsa sulfexigens: UWK_03523
Help
Entry
UWK_03523 CDS
T02473
Name
(GenBank) VCBS repeat-containing protein
KO
K20276
large repetitive protein
Organism
dsf
Desulfocapsa sulfexigens
Pathway
dsf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UWK_03523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_5
Cadherin_4
Big_9
DUF4114
TSP_C
Cadherin
CBM60
Motif
Other DBs
NCBI-ProteinID:
AGF80038
UniProt:
M1P9B8
LinkDB
All DBs
Position
3923221..3930366
Genome browser
AA seq
2381 aa
AA seq
DB search
MSSENNPVSSSSSPIGNSTENTQQDWMDLDQQGVAGETLKAKKWTTQRRLVDDASYQGNI
HTGTEATTELNKSDTLSGDALNYQSIANEGKETQDNNGPEEFSDESQRGLSPDMDSLNRT
DTPSATSAAYEHTTEAESLVTSSGSDTLKFEEHIDEAKSHGRTATENKSTTRLAQPAATE
TPPEDLPLENSSQERNTATVSELQQKSEISDAVDPSTQTPTTAPGSAPEPVPDHEIITES
SASAPILTTADAIGVEDTMIAIDISSQLTDTDGSESLAITIGGVPEGAFLSAGTSLGNGE
WQLTPDQLENLSLTPPANSDEDFSLTVTATSTESHGGQQNSRSEIIDFFIEAVPDTPELT
TVAATGTEDTAITLDISTALTELDGSEILSAITLSGLPEGSIVSAGTQNIDGSWSVAQDD
LEGLQLTPPKDYSDNFEINLSVTATDSNGSTSTSTAVLPVTITAAPDEAVISGSGAILAE
DTLQTASGQLTVVDPDADEAHFTAETIEGTYGFLDVATDGSWTYNLNNDADTVQQLGTGD
TVTDTLTVTSADGSTHDLVMTITGTNDAISVVSDSNTAPNTIMENAADGTEIHLSGLATD
ADGDAILYTLVDDQGNEITNGPFSINRESGVVTLQDRSLIDYETESSHTLHIQASSADGT
SSTSDFQVQIEDVDIIKTTDLGGDVNGTAVTFTVTGDHYDPKNIQDVGAGSPHYRIRVNG
EPLEIDGQNTFSVEANRGHIEDNHVVRDGNDVELVTFRVPQGTDVDSVSIEFINDAYDTS
SDRDGDGITTEDRNLVVKELNIGGTVNDDGSIDGGTTLQAEDIEVSQYIASNGADVSGRE
VMPWQGSMTFYPDGVPQEAPILVDDNANISEDSAVVLTGNILSNDTDANNGSNFSVTGLS
GVTVLQDNFDDGNADGWVEISSNGADTDRWQVVDGAIGEKSNSAKGIMAHDMGDSADSTN
YEVSVDIHANAGDTYNNNVGLTFGYEDNANYYMIKWDDYSDNYSESSTHKDFQLIKVEDG
HQTIIDQIDHAELPSDFTLSVNVSNDSGISISVDGEEKLRAADEHPAINTIGLNTGDNDS
GISYDNVSVINNDIPIEDTTSIDGTYGTLTLNQDGSYSYELNDANNDVQMLHDGEQLTET
FAVNVLENHSGEAGTETLNITINGSNDGPVAINDSTVSELATVFQDDFNDGNTDGWTEIS
YNDADTGNWQAVDGAIGERSNSARGIMAHNMGDDAESTNFEVSVDVHANSGQTGNNNVGI
TFGYEDNSNYYMVKWDDYSENYSESSTHKDFQLIKVENGHQTIIDQIDQADLPSDFNLSV
NVSDDNGIAIMVDGKEMLTAVDEHPAINTIGLNTDDNDGGISYDNVSVKVASDQTIVTDE
DSSIVVTADSLLANDTDVEGDTLSISAVSENVLDVDGNIVGTASQDDSGNIVFTPGDALD
ALAEGESTNVNFTYTVSDGQGGTDTATATITVTGKDNDLTYVSESAGYKNVVGMYETDDQ
GNPVSGTVIIDDQNGMAGGTHLADLEPGNYEFFIIANGANEVDTESSISFDTSGDKPILL
IDGEPAAHPVYFTEPGFNPDGKDHFHFESDGEGGTFIKIEDLPDLGDADFEDVVLHTNFE
MDDRTASGELSDGDQAANSVVENTAPEAIADIADIKAFELPEGGSIVSTESNTIVVKGEI
VTEGDTGSSVDQWTFHHGGGPLTIDTLSESGTNFTDIDGDGAKNHIDTMMRLYDEDGNQV
AMNDDSSMQTGDGSTNDYFSHIQDSYIQVDDLPPGNYSLAIGSWELTQDEVANGHNDNSD
QNIRYDHAQDTGPYQITLTGDVSFSEESPLATDEDTGLTINADTLLANDSDVDGDSLSIV
AVGTPVDADGKVVGTTELVTENGEQQIRFVPGAQLDSLETGESSSVSFSYTIDDGQGGTD
TATATITVAGTDNDLTYVSESAGYKNVVGMYETDDQGNPVSGTVIIDDQNGMAGGTHLAD
LEPGNHEFFIIANGANEVDAESSISFDTSGNKPILLIDGEPATHPVYFTEPGFNPDGKDH
FHFESDGEGGTFIKIEDLPDLGDADFEDVVLHTNFAMDDRTIVEESILDEQLNNSIATGI
ATAGFDTSITDTEANGIHSEAMEDLSLNMPFLTLPGDAEGSEQAAEPQETAIVTQDTVLQ
ADTPVSESFTEDSQQSLNPPTDDDLALSLPSISLNDLFDEPADNNYDPAVTTENETSAVS
NTDENTNPANEAATDTTDETSTTEAVGQEPQEELVDDATDLHSIAGSEVEETELNTDNLH
IDLASDTESESSTNSEDESSSLDRFAATSANASEDNDNSPLDNFSACSQSEETSEFSSVE
EIDTIDDNATDQVDDAGLNDVNAIQEDLSQEAEQVDANGAC
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagagaacaatccagttagctcttcttccagccccattggcaattcaacagag
aatactcaacaggactggatggatcttgaccagcagggagtagcaggagaaacccttaag
gcaaagaaatggacgacccagcgacgccttgtcgacgatgcatcctatcaaggcaacatt
catacaggaactgaagcgactactgagctgaataaaagcgacactctctccggggatgcc
ctgaactatcagtcaattgctaatgaaggtaaagagacacaggacaacaacggcccagag
gaattttcagacgaatcccaacggggcttatcacccgacatggattccctgaacagaacc
gacacaccatcggccacatctgcagcatacgaacatacgactgaagctgaaagtcttgtt
acatccagcggaagtgacacactgaaatttgaagaacatattgatgaagccaaatcacat
ggacgcactgcgactgaaaacaaatctacaacacgattggcccagcctgcagcaacagaa
acgcctccggaagatctccccctggagaatagcagtcaggaaaggaacacagccaccgta
tcggagttacagcagaaatcagagattagtgacgctgttgatccctccacacaaacaccc
accacagctcctggatctgcccctgaacctgtacctgaccatgaaataatcacagaaagt
agtgcatccgcgcctattttgaccacagctgatgctatcggtgtcgaagatacaatgata
gcaattgatatttcaagtcagcttacagacaccgacggttcagaatcccttgctatcacc
ataggcggtgttcctgaaggagcattcctttcagccggtacaagccttggtaatggagaa
tggcagctcactccggatcagctcgaaaatctcagcctgacaccacctgccaatagcgac
gaagacttcagtcttacggtcaccgcaaccagcacagaaagccatggcggtcagcaaaac
tccagatctgaaatcatcgatttttttatagaagctgttcccgacacgccagagctaaca
actgtcgccgcaaccggcacagaagacacggcaattaccctcgacatcagcactgctctc
accgagcttgatggttcagaaatactctcagcaatcacactatcaggccttcctgaaggt
tccattgtatccgccggaacacaaaacattgatggttcctggagtgttgcacaagacgac
cttgaaggactacagctcactccaccaaaagattattccgacaattttgaaatcaatttg
tcggtcacggcaaccgattccaatggttccacttcaaccagcactgcagtccttccagtc
actatcacagcagcgcccgacgaagcagttatcagtggtagtggagctatacttgccgaa
gatacccttcaaacagcgtcaggtcagttgactgttgttgatcccgacgcagatgaggcc
cactttaccgctgaaacgattgaaggaacatacggttttcttgacgttgcgacagacgga
tcgtggacatacaatctcaacaacgacgctgacacagtgcagcagctcggtactggtgat
actgttaccgataccctcacggtaacttctgctgatggcagtacccatgatctggtcatg
accataaccggtacaaatgacgccattagcgtagtgtcagatagcaacacagcaccaaac
actattatggagaatgccgcagacggcacagaaatccacctctctggactggcaaccgat
gcagatggagacgccatactctatacactcgtagatgatcaaggaaatgaaatcaccaat
ggtccatttagtattaatagagaaagtggcgttgttactcttcaggatcgtagcctgata
gactacgaaactgaaagcagtcacaccctgcatatccaggcaagcagtgcagacggcacc
tcgagcaccagtgatttccaggtacagattgaagatgttgacattatcaaaacaaccgat
cttggtggtgatgtaaatggcactgctgttacctttacagtaacaggagatcattacgac
ccaaaaaacattcaagatgtaggtgccggatccccccactaccgtatcagggtcaacggc
gaacctctggaaattgacggccagaacactttttcagttgaagccaaccgtggccatatt
gaagataaccatgttgtccgagacggaaatgatgtggaactggtgactttcagggtaccc
caaggaactgatgtcgattctgtttcaattgaattcattaacgatgcctatgatacctcc
agtgacagggatggtgacggaatcaccaccgaagatcgaaaccttgtagtaaaagagttg
aatatcggaggcactgtcaacgatgacggaagtattgacggaggcacgaccttgcaggct
gaggatatcgaagtgtcccaatacattgccagtaatggtgctgacgtctctggacgcgaa
gttatgccatggcagggaagcatgaccttttatccggatggtgtgccacaggaagcaccc
atattggtcgatgataacgcaaatatttcagaagacagtgctgtagttcttacaggcaat
attttatccaatgataccgatgcaaacaacgggagcaacttcagtgtgactggattatct
ggagtcactgttctccaggataatttcgatgatggcaatgctgatggctgggtagaaatc
agttccaatggcgctgatactgatagatggcaggtagttgacggggctattggtgaaaaa
agcaactcagcaaagggaatcatggcccatgacatgggggattctgccgacagcaccaat
tacgaggtatcagttgatatacatgccaatgccggggatacgtacaataacaatgttggc
cttacctttggttatgaagacaatgccaattattacatgattaaatgggatgactactcc
gacaactattcagaaagcagcacccacaaagattttcagctgatcaaagttgaggatggc
caccaaacaataattgaccagatagatcacgccgaattacccagtgatttcacattatca
gtcaatgtatccaacgatagcggcatatcaatatctgttgacggtgaagaaaaactcaga
gctgcagatgaacatccagccatcaacacaattggcctcaatactggcgataacgatagc
ggtatcagttatgacaatgtatcggttattaataatgatattccaatagaagatacaaca
tctattgacggtacctatggtacattaacccttaaccaggatggcagttattcttacgaa
ctcaatgatgccaataacgatgtacaaatgcttcatgatggtgaacagctcacagagacc
ttcgctgtcaatgtccttgaaaaccactcaggagaagcaggaactgaaacactgaacatt
accattaatggaagcaatgacggccccgttgcaataaacgacagtacagtatcagaactc
gcaacagtcttccaggatgattttaacgatggcaatactgatggctggactgagattagt
tacaacgacgctgatactggcaattggcaagctgttgatggtgctattggcgaaagaagt
aattccgcaagaggaatcatggcccataacatgggtgatgatgcagaaagcaccaatttt
gaagtttcggtggacgttcatgccaactctggacaaactggaaataataatgttggaatt
acatttggatatgaagacaacagtaattactacatggtcaagtgggatgattactccgaa
aactactcagaaagcagtacccataaagatttccagttaatcaaagttgaaaatggccac
caaacaataattgatcaaatagatcaggcagatctgcccagtgatttcaacttgtcagta
aatgtgtccgacgataatggtatagctattatggttgatggtaaagaaatgctgacagca
gtagatgaacatcctgctattaacacgatcggccttaacactgacgacaatgacggcggc
atcagctacgataatgtctcggttaaagtagcatccgaccagacaattgtgaccgacgaa
gatagttccattgttgtcactgctgacagtctccttgccaacgatacagatgttgaggga
gacactctgtccatttccgctgtatccgaaaatgtgcttgatgttgatggcaatattgtt
ggcaccgcctcccaggatgacagtggcaacatcgtattcacccctggtgatgcccttgat
gctcttgcggaaggtgagagtacaaatgtcaacttcacgtacacggtcagtgatggccag
ggtggaactgatacagccaccgctacgatcaccgtcacaggaaaagataacgacctcacc
tatgtttctgaatcagctggctataaaaatgtcgtcggaatgtatgaaaccgacgaccag
ggcaatcctgtcagtggtaccgtgataatcgacgatcaaaatggcatggcaggtggcacc
catcttgccgatctggaacctggcaattatgaatttttcattatagccaacggtgcaaat
gaggtggatactgagagcagtatcagctttgataccagcggagataaaccaatacttttg
attgatggagaacccgctgcccaccccgtctatttcaccgaaccaggttttaaccctgac
ggcaaggatcattttcatttcgaatcagacggtgaaggtggcaccttcatcaagatagaa
gacttacccgaccttggggatgctgattttgaagatgtggtgcttcacaccaacttcgag
atggatgacagaacagccagtggcgagctttctgacggtgatcaggcagcaaacagtgtg
gtggaaaatactgctccagaggccatcgctgacatagctgacatcaaagcctttgaacta
cccgaaggcggcagtattgtctcaacggaaagcaataccatcgtggtcaaaggtgaaatt
gtcactgaaggtgacacggggtcgagtgttgaccagtggacatttcaccatggcggagga
ccattgaccatcgataccctttcggagagtggcacaaacttcactgacattgacggtgac
ggtgctaagaaccacatcgacaccatgatgcgtctctatgacgaggacgggaaccaggtc
gccatgaatgacgacagcagcatgcagaccggtgacggttcaaccaatgattacttctct
catattcaggactcctatatccaggtcgatgatctgcctcccggtaattactctcttgcc
atcgggtcctgggagcttacccaggatgaagtagcaaatggccataacgacaactctgat
cagaatatacgctatgaccatgcccaggataccggcccctatcaaataaccctcacagga
gacgtatccttctcagaggaaagtcctcttgccactgatgaagacacaggactcaccatc
aacgctgacacccttcttgctaatgatagcgatgttgatggggacagcctcagtatcgtg
gcagtgggtacaccggtggatgcagacggcaaggtggtgggaaccaccgaacttgtaaca
gaaaacggcgaacagcagattcgctttgtaccgggtgctcagctcgattcccttgaaact
ggagaatcaagcagtgtcagcttcagttacaccatcgatgacggccagggggggaccgat
acagccactgctacgatcaccgttgcaggaacagataacgacctcacctatgtttctgaa
tcagctggctataaaaatgtcgtcggaatgtatgaaaccgacgaccaaggcaatcctgtc
agtggtaccgtgataatcgacgatcaaaatggcatggcaggtggcacccatcttgccgat
ctggaacctggaaatcatgagtttttcatcatagccaacggtgcaaatgaggtggatgct
gaaagcagcatcagctttgataccagcggaaacaaaccaatacttttgattgatggagaa
cccgccacacaccccgtctattttaccgaacctggttttaaccccgacggcaaggatcat
tttcatttcgaatcagatggtgaaggtggtaccttcatcaaaatagaagacttacccgac
cttggggatgctgattttgaagatgtggtgcttcacaccaacttcgcgatggatgacagg
acaatagtagaagaatccatacttgacgaacagttaaataattccatagcaacagggatt
gccacagccggatttgatacttccataaccgatactgaagcaaacggcatccatagcgaa
gcgatggaagatctctctctcaatatgccattccttactctgccaggtgacgctgaaggg
agcgaacaggcggccgaaccccaggaaacagcaattgtaacgcaggacacagttcttcag
gctgacacccctgtttcagaatcattcacggaagacagccaacagagtttgaatccaccc
acagatgatgacctggcgctttcactcccctccatatctctcaatgatctctttgacgaa
ccggctgacaacaattacgatcctgcagtaactactgaaaacgaaacaagcgctgttagt
aataccgatgagaatacgaatcctgcaaatgaagcagcaacagacacaactgatgagaca
tcgactaccgaagctgtgggtcaggaacctcaggaagaacttgtagatgatgccactgat
ttacatagtattgctggcagtgaggttgaagaaactgaattaaataccgataacttacat
atagatcttgcgagtgatactgaatccgagtcgtcaacaaattcagaggacgaaagcagc
agtcttgatcgatttgcagcaacatcagccaatgcatcggaagataacgataactctcct
cttgacaacttctctgcctgcagtcagtccgaagaaacatcagaattctcatcggttgaa
gaaattgacaccatagacgacaatgccacagaccaggtagacgatgccgggttaaatgat
gttaatgctatccaggaagacctttcccaagaagcggaacaggttgacgcgaatggtgca
tgttga
DBGET
integrated database retrieval system
