Desulfocapsa sulfexigens: UWK_03534
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Entry
UWK_03534 CDS
T02473
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dsf
Desulfocapsa sulfexigens
Brite
KEGG Orthology (KO) [BR:
dsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsf03009
]
UWK_03534
Enzymes [BR:
dsf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
UWK_03534
Ribosome biogenesis [BR:
dsf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
UWK_03534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
Methyltransf_15
MTS
Methyltransf_25
RrnaAD
TRM5-TYW2_MTfase
UPF0020
TRAM
DOT1
Motif
Other DBs
NCBI-ProteinID:
AGF80049
UniProt:
M1NKE0
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All DBs
Position
3943320..3944636
Genome browser
AA seq
438 aa
AA seq
DB search
MTSSTYHIEKLLHGGLGLGRNEDKQKMLIEGVISGETVAAKIQSLKKNRNTAVATSIIEP
SSERIKAPCQYYKQCGGCDFQHMNYPRQLQEKQAILKDLLQQSGNTILQEAATQILNAPL
PSPSQTHYRQRIRLQVDNKQTLGFHKRRSHDCVAIESCLLATPKINDCLQKLLPQYAFNK
LLNQTETVEILFDPDSSTVTLLIQFKRKPRPADKQHAQDLINTISELTNIFFIGDGFSVT
GNASLSFTLPPLVPHTTKTVQLSLETGGFCQVNVEQNTNLVKTVLDFCAVTKKDTILDLF
CGMGNFSIPLAERSQSVLGIEGQGSAIRSAIRNSSNAGQDNTIFKKQPIHAACSELAKAG
SLFDCIILDPPRQGAPGLARVLSALCRKRLVYISCDPVTLCRDLEDLLQYGFVIKKLQPI
DMFPQTHHIETVALLETA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttcaacataccatattgaaaaactcctccatggtggccttggtctagggcgc
aacgaggataagcagaaaatgctgatcgagggtgttatttccggtgaaacagtcgctgca
aaaatccagtcactgaaaaaaaaccgcaacacagctgtagctacatcaattatcgagccg
tcttctgaacgtatcaaagcgccctgtcaatattacaaacaatgcggaggatgtgacttc
cagcacatgaattatccgcggcagttgcaggaaaagcaggcgattctaaaagacttactc
cagcagagcggaaacaccatacttcaagaagctgccacccaaatactgaacgcacctctg
ccctcgccatcccagacccactaccgacaacgtattcgtcttcaggtggacaacaagcag
acattaggattccacaaacgtcgcagtcatgattgtgtagccatagagagttgcttactg
gcaacaccgaaaataaatgattgtctacagaaactcttgccgcagtatgcttttaacaaa
cttctcaaccagacagaaactgtcgaaatactgtttgatccagacagttcaactgtcacc
ctccttattcagttcaaacgcaaaccgcgccctgccgataagcagcatgcacaggatctg
attaacacaatttctgaactcacaaatattttctttatcggtgatgggttttctgtaaca
ggcaatgcttctctttcattcaccctgccgccactcgtccctcacaccacaaaaacagtg
caactgtctctcgaaacgggcggattttgtcaggtgaacgtggaacaaaacaccaatctg
gtaaaaacggttctcgatttctgcgctgtcacaaagaaagataccattcttgatctattc
tgtggaatgggcaatttttccatacctcttgcggaacggtcacagtcagttctgggaata
gaggggcagggctctgctattcgcagtgccattagaaacagcagcaatgcaggacaggac
aacaccatcttcaagaagcagccaattcatgctgcatgctcggaactggcaaaggctggc
agcctcttcgattgtatcattttggatcctccacgacagggcgctcccggccttgccagg
gtgctgagcgccctctgcaggaaacgtctggtctacatttcctgcgacccggtaactctc
tgtcgtgatctggaagacctcttacaatacggatttgttatcaagaaattacagcccatc
gatatgtttccgcaaactcatcatatcgaaaccgtggccctcctggaaacagcctga
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