Dyella stictolepturae: ACQZ29_00295
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Entry
ACQZ29_00295 CDS
T11880
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dsg Dyella stictolepturae
Pathway
dsg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACQZ29_00295 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsg03021
]
ACQZ29_00295 (rho)
03019 Messenger RNA biogenesis [BR:
dsg03019
]
ACQZ29_00295 (rho)
Transcription machinery [BR:
dsg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACQZ29_00295 (rho)
Messenger RNA biogenesis [BR:
dsg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACQZ29_00295 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
XTY91750
LinkDB
All DBs
Position
1:complement(69290..71044)
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AA seq
584 aa
AA seq
DB search
MSDIESKENTDAKSADAKPVAEPRTRAPRRSAAAAAEAKAEKQAQLDMPPPPPVERVERV
ERAERAAPPAEAPASAPSTGGESAPQGDGSQGGQRQPQEAREGGQQQGGGQGFNNRNDRN
DRGRRRRHERNQPRGQGGNQGGHPRNNNGLPVDDDYGDAGSNDRLINLTELKRKNAIQLL
EFAESLGVQEGVARARKQDVVFNILKAHARSGGGIWAEGVLEILQDGFGFLRSADESYLA
GPDDIYVSPSQIRRFNLRTGDYITGRVRHPKEGERYFAMLKVDDINGDPPEASKNKMLFE
NLTPLFPRKSFKLERGNGSTEDITGRILDLVAPIGRGQRGLIVSQPKSGKTMMLQNIAQA
IQYNHPDVHLIMLLIDERPEEVTEIARTVRAEVISSTFDEPAVRHVQVAEMVIERAKRLV
EHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNVEEGGSLT
IIATALTDTGSKMDEVIYEEFKGTGNMEVHLSRRISEKRVYPAIDINRSGTRREDLLIEP
DLLSKIWILRKLLHPMDELAAMEFMLDKMKNTKSNDEFFNSMKR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatatcgaaagcaaagaaaacaccgacgccaagagcgccgacgccaagcctgtg
gctgagcctcgcactcgcgcgccacgccgatccgccgcagcggctgcagaggccaaggcc
gaaaagcaggcgcagctggatatgccaccgccgcctccggtcgagcgtgtggaacgtgtc
gagcgagcagagcgcgccgcgcccccagccgaagcaccagcatctgcaccaagcaccggt
ggcgaatccgcgccgcagggtgacggtagccagggtggtcagcgccagccgcaggaagcc
cgcgagggcggccagcagcaaggcggcggccagggcttcaacaaccgcaatgatcgcaac
gaccgtggtcgtcgtcgtcgccacgaacgcaatcagcctcgtggacaaggtggcaaccaa
ggtggtcacccgcgcaataacaatggcttgccggtcgacgacgattacggcgacgccggc
agcaacgaccgcctgatcaacctgaccgaactcaagcgcaagaacgcgatccagcttctg
gaattcgccgaatcgctgggcgtgcaggaaggcgtggcgcgtgctcgcaagcaggacgtg
gtcttcaacatcctcaaggcacatgcccgctccggcggcggcatctgggccgagggcgtg
ctggaaatcctgcaagatggcttcggcttcctgcgttcggctgatgagtcttacctggcc
ggtccggacgacatctacgtgtcgcccagccagatccgccgcttcaacctgcgcaccggt
gactacatcactggacgcgtgcgccatccgaaggaaggcgaacgttacttcgcgatgctc
aaggtcgacgacatcaacggcgatccgccggaggcgtcgaagaacaagatgttgttcgaa
aacctgacaccgctgttcccgcgcaagtcgttcaagctcgagcgcggcaatggttccacc
gaagacatcaccggccgcatcctggacctggtggcgccgattggtcgcggccagcgcggt
ctcatcgtgtcgcagccgaagtccggtaagacgatgatgctgcagaacatcgcgcaggct
atccagtacaaccatccggacgtccatctgatcatgctgttgatcgatgagcgcccggaa
gaagtgacggaaatcgcccgtactgtgcgtgcggaagtgatctcctccaccttcgatgag
ccggctgtgcgccacgtgcaggtcgccgaaatggtgatcgagcgcgccaagcgtctggtc
gagcacaagaaggatgtggtgatcctgctcgactccatcacccgcctcgcccgcgcctac
aacaccgtggtccccagctccggcaaggtgcttacgggtggtgtggacgccaacgcgctg
cagcgcccgaagcgtttcttcggcgcggcacgtaacgtcgaggaaggcggcagcctgacc
atcatcgccaccgcgctgaccgacaccggcagcaagatggacgaggtgatctacgaagag
ttcaagggcactggcaacatggaagtgcacctgagccgccgcatctccgagaagcgcgtc
tacccggccatcgacatcaatcgttccggcacccgccgcgaagatctgctgatcgaaccg
gacctgctctccaagatctggattctgcgcaagctgctgcatccgatggacgagctggcc
gcgatggagttcatgctcgacaagatgaagaacaccaagtccaacgacgagttcttcaac
tccatgaagcgctga
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