KEGG   Drosophila simulans: Dsimw501_GD13439
Entry
Dsimw501_GD13439  CDS       T01065                                 
Symbol
Dsim_GD13439
Name
(GenBank) uncharacterized protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
dsi  Drosophila simulans
Pathway
dsi03018  RNA degradation
dsi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dsimw501_GD13439 (Dsim_GD13439)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dsimw501_GD13439 (Dsim_GD13439)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsi03019]
    Dsimw501_GD13439 (Dsim_GD13439)
   03041 Spliceosome [BR:dsi03041]
    Dsimw501_GD13439 (Dsim_GD13439)
Messenger RNA biogenesis [BR:dsi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dsimw501_GD13439 (Dsim_GD13439)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     Dsimw501_GD13439 (Dsim_GD13439)
Spliceosome [BR:dsi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    Dsimw501_GD13439 (Dsim_GD13439)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-ProteinID: KMY96947
UniProt: B4QMK6
LinkDB
Position
3L:complement(1686682..1687079)
AA seq 95 aa
MSGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHI
IRGDNIAVIGLIDETIDSRLDLANIRGEPLGPVVH
NT seq 288 nt   +upstreamnt  +downstreamnt
atgtccggtttggagtcgtatatcaatcacacagtctccatcattacggcagacggacgg
aacttcatcgggacactcaagggattcgaccagaccatcaatattatcatagacgagtgc
catgagcgcgtcttctctaccacctccggcatcgagcaaatcgtgctggggctgcacatc
atccggggggacaacatcgcggtgatcggactgatagacgagaccatcgactcccgcctg
gatttggccaacattaggggcgagccgctgggtcccgtggtgcactag

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