Drosophila simulans: Dsimw501_GD17207
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Entry
Dsimw501_GD17207 CDS
T01065
Symbol
Dsim_HDAC6
Name
(GenBank) HDAC6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
dsi
Drosophila simulans
Brite
KEGG Orthology (KO) [BR:
dsi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsi01009
]
Dsimw501_GD17207 (Dsim_HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsi03019
]
Dsimw501_GD17207 (Dsim_HDAC6)
04131 Membrane trafficking [BR:
dsi04131
]
Dsimw501_GD17207 (Dsim_HDAC6)
03036 Chromosome and associated proteins [BR:
dsi03036
]
Dsimw501_GD17207 (Dsim_HDAC6)
Enzymes [BR:
dsi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
Dsimw501_GD17207 (Dsim_HDAC6)
Protein phosphatases and associated proteins [BR:
dsi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Dsimw501_GD17207 (Dsim_HDAC6)
Messenger RNA biogenesis [BR:
dsi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
Dsimw501_GD17207 (Dsim_HDAC6)
Membrane trafficking [BR:
dsi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Dsimw501_GD17207 (Dsim_HDAC6)
Chromosome and associated proteins [BR:
dsi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
Dsimw501_GD17207 (Dsim_HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
KMZ09842
LinkDB
All DBs
Position
X
Genome browser
AA seq
1186 aa
AA seq
DB search
MSPPIVTRRGAQQAKIQTRAMASKSKTGTPGAPTAAGGSAGGISSSSGSISGGFNTADPR
KTNKPSAALLEAKRRARNNMLKNQGCGSQESVTDIFQNAVNSKSMVRKPTALIYDESMSQ
HCCLWDKEHYECPERFTRVLERCRELNLTERCLELPSRSATKDEILRLHTEEHFERLKET
SGIRDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVTGKAQNGMAIIRPPGH
HAMKAEYNGYCFFNNVALATRHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSI
HRFEHGSFWPHLHESDYHAIGSEAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQ
PELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADARVAVVLEGGYCLDSLAEGA
ALTLRSLLGDPCPPLVETVPLPRAELAQALLSCIAVHRPHWRCLQLQQTYDCAELQDRDK
DEDLHTVLRHWMGGPPPVDRYPTRDTAIPLPPEKVVSNAARLQVLRAETKLSVPSVKVCY
AYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLTQMKQLSARAATTDEVCLAHTRA
HVNTVRRLLGREPKELHDAAGVYNSVYLHPRTFDCAVLAAGSVLQAVDSVLRGESRSGIC
NVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNP
KVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLVM
PIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALASGRIIVCLEGGYNV
NSISYAMTMCTKTLLGDPVPTPQLGATALQKPPTVAFQSCVESLQLCLQVQRTHWRSLEF
VGRRLPRDPVVGENNNEDFLTASLRHLNISNDDATVAASGPAVDRPDCGDERPSGSKPKV
KVKTLSDYLADNKEALEQSEMFAVYPLKTCPHLRLLRPEEAPRSLDSRAECSVCGSTGEN
WVCLSCRHVACGRYVNAHMEQHSVEEQHPLAMSTADLSVWCYACSAYVDHPRLYAYLNPL
HVDKFQEPMAWTHGCACREDGCYATGPDGRDEDDENNDDDNVAGSSICLRLERNNXPLAI
RVLDALTDYVCALCPPLRHLIQFLAEHLWPLLERIYLNLLHYFLAH
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcccatcgtcacgcgacggggtgcgcagcaggcgaagattcagacgcgggca
atggccagtaaatcgaagacgggcacgccaggggcgccgacggcggcgggtggctctgcc
ggcggcatcagcagcagcagcggcagtatcagcggcggatttaataccgccgatccgcga
aagacgaacaaaccgagcgcagcgctcttggaggcgaaacgtcgagcgcggaacaacatg
ctcaagaatcagggctgcggatcgcaggagagcgtcacggatatattccagaatgctgtc
aacagcaagagtatggtgcggaaacccacggcactgatctacgatgagtccatgagccag
cactgttgcctgtgggacaaggagcactacgagtgtcccgagcgcttcacacgcgtcctg
gaacgctgtcgcgaactaaatctgacggagcgctgcctggagttgccctcgagatcggcc
accaaggatgagattctgcgcctgcacacagaggagcacttcgagcggctaaaggagacg
tccgggattcgcgatgacgagcgcatggaggagctgagctcccgctacgattcaatttac
attcatccgtccactttcgagctctccctactggccagcggctctaccatcgagttggtg
gaccatctggtcaccggaaaggcgcagaatggcatggccatcatccggccaccgggtcac
catgcgatgaaggccgagtacaacggctattgcttcttcaacaacgtggcactggccacc
cggcacgccctcgatgtgcacaagctgcagcgcatcctgatcatcgactacgatgtgcat
catggacagggaacccagcggttcttctacaacgatcccagggtggtttacttctccatc
catcgcttcgagcacggcagcttctggccgcatctgcacgagtcggactaccacgccatt
ggatcggaagcgggcacgggatacaacttcaatgtgccgttgaatgcgacgggtatgacc
aatggcgattacctggccattttccagcagttgctgctgccggtggccctggaattccag
ccggagctgatcatcgtttcggctggctatgatgcggcgctgggctgtccggagggtgag
atggaggtgacgccggcctgctatccgcacctgctgaatccgctgctgcgactggccgat
gcccgggtggccgtcgttctggagggcggctactgcctggactcactggccgagggtgcg
gccctaaccctgcgctccctgctcggtgatccctgtccgccgctggtggagacagtgcca
ctgccgcgtgcggaactcgcccaggccctgctcagctgcattgccgtgcaccgaccccac
tggcggtgtctgcagctccagcagacctatgattgcgccgaattgcaggatcgggataag
gacgaggatctgcacacggtgctgcgccactggatgggcggaccaccgcctgttgatcgt
taccctacgcgcgatacggccattccgctgccaccggaaaaggtggtcagcaatgcggct
cgtctgcaggtgctgcgcgcggagaccaagctatcggtgccgtcggtgaaggtgtgctat
gcctacgatgcccaaatgcttctgcactgcaatctcaacgatacggggcatccggagcag
ccgtcgcgcatccagcacatccacaagatgcacgacgactacggtctgctgacgcagatg
aagcaactgtccgccagggcggccaccacggacgaggtgtgcctggcccacactcgcgcc
catgtgaatacagtgcgtcgattgcttggccgcgagccgaaggaactgcatgacgctgct
ggggtctacaactcggtgtacctgcatccgcgcaccttcgactgcgccgtcctggccgcc
gggtcagtgctgcaggcggtggacagtgtgctgcgtggcgagtcccgcagcggcatctgc
aacgtccgtccgccgggccatcatgccgagcaggatcatccgcacggcttctgcatcttc
aataatgtggccattgcggcgcagtatgccatacgggacttcggtctggagcgtgtgctg
atcgtggactgggacgtccatcacggcaatgggacgcagcacatcttcgagtccaatccc
aaggtgctctacatcagcttgcatcgctacgagcacggctccttcttccccaagggaccc
gatggcaacttcgatgtggtgggcaagggagccggcaggggcttcaatgtgaacataccc
tggaacaagaagggcatgggtgacctggagtacgcactggccttccagcagctggtcatg
cccattgcgtacgagttcaatccgcagctggtgttggtatccgccggattcgatgctgcc
atcggcgatcccttgggcggatgcaaggtgacgcccgagggttacggcatgctcacccac
tggctgtcggctttggccagcggtcggataatcgtttgcctggaaggtggctacaatgtg
aactccatttcgtacgcgatgaccatgtgcaccaagacgctgctgggtgatcccgtgccg
acgccccagctgggagccacggcgctgcagaagccaccaacggtggccttccagagctgt
gtggaatcgctgcagctgtgcctgcaggtgcagcgcacccactggcgctcgctggagttc
gtcggacggcggctgccgcgcgatcccgtcgtgggcgagaacaacaacgaggattttctt
accgcctccttgcgacacttgaatatctcaaatgacgatgctacggttgcggcaagcgga
cccgccgtcgatcgtcccgactgcggcgatgagcggcccagcgggagcaagcccaaagtc
aaggtaaaaacgctcagcgactacttggcggataacaaggaggccctcgaacagagtgag
atgttcgccgtgtatccgctcaagacgtgtccgcacttgaggctcctgcgtccggaggag
gcgccccgatcactagacagcagagcggagtgcagcgtttgcggatcgacgggggagaac
tgggtgtgcctgagctgcaggcatgtagcctgcggtcgctatgtaaacgcccacatggag
cagcattcggtggaggagcagcatccgctggcgatgagcacggcggacctgtctgtgtgg
tgctacgcgtgctccgcgtacgtggaccatccccgcctgtatgcctacctcaatccgctg
cacgtggacaagttccaggaaccgatggcctggacacatggctgtgcgtgtcgcgaggat
ggatgctatgctacggggcccgatggtcgagatgaggatgacgagaataatgatgatgac
aatgtcgccggtagcagcatctgcctgcgactggagcgcaacaactgacccttagccatc
cgcgtgctggacgccctcacggactacgtgtgcgcgctctgcccgccactcagacaccta
atccagttcctggccgagcacctctggccgctgctggagcgcatttacctaaacctattg
cactacttcctggcccactga
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