Drosophila simulans: Dsimw501_GD17239
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Entry
Dsimw501_GD17239 CDS
T01065
Symbol
Dsim_GD17239
Name
(GenBank) uncharacterized protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
dsi
Drosophila simulans
Pathway
dsi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dsi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dsimw501_GD17239 (Dsim_GD17239)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsi03021
]
Dsimw501_GD17239 (Dsim_GD17239)
Enzymes [BR:
dsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dsimw501_GD17239 (Dsim_GD17239)
Transcription machinery [BR:
dsi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
Dsimw501_GD17239 (Dsim_GD17239)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Zn_ribbon_9
Motif
Other DBs
NCBI-ProteinID:
KMZ09930
LinkDB
All DBs
Position
X
Genome browser
AA seq
1383 aa
AA seq
DB search
MPKEQFRASALNKKISHVQFGISGADEIQQEALVRIISKNLYQAQRQPVPYGVLDRRMGI
STKDAMCDTCGQGLNECIGHFGYLDLALPVFHIGHFRSTINILQMICKVCAHVMLKPEDR
QLYEKKLHNPNFSYLGKKALHVQMLAKAKKVTKCPHCGSPNGGVKKGPGLLKILHDPYKG
RKMDLLFTSNMNEMLHSTQANRDLNSTLGNYSTAEELTPLMVLDLFEQIPQRDVALLGMC
SHDAHPKHLIVTRVFVPPACIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQRHMATGG
KIELIHEDWDFLQLHVALYFHSEISGIPINMAPKKTTRGIVQRLKGKQGRFRCNLSGKRV
DFSGRTVISPDPNLMINQVGVPVRVAKILTYPERVNPANIRHMRELVRNGPSMHPGANYV
QQRGSSFKKYLAYGNREKVAQELKCGDVVERHLRDGDIVLFNRQPSLHKMSIMCHRAKVQ
PQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARAEALILMGNQSNLVTPKNGEILIAA
TQDFITGGYLLTQKEVFLTKEEAMQLAACFLANEDSTMHIKLPPPALLKPRRLWTGKQMF
SLLMRPNDDSQVRLNMVNKGRNYTGNKDLCSNDSWIHIRNSELMCGVMDKATMGSGTKQC
IFYLLLRDFGELHATKAMWRLARIASYFLQNRGFSFGISDVTPSKKLLQHKELLLNNGYA
KCNEYIDLLKAGTLQCQPGCTPEETLESVMLRELSAIREQAAKTCFAELHPTNSALIMAL
SGSKGSNINISQMIACVGQQAISGKRVPNGFENRALPHFERHSAIPAARGFVQNSFYSGL
TPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGTVRNAVNEMVDTIY
GGDGLDPVSMETRNKPVDLVHQYDNLRAQHPQGTDRPLNAEEMSEALETLLKTPEFAEAR
DDFKLDVRNHINTVSKRIGQLQKRYEKCINLCHQIECLTTEQLLQFVRRINDRYNRAVTE
PGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAE
LENCHSMEFARQVKARIEKTTLAELSSYVEVVCGPYSCYLAIGVDMARIKLLGLHIDLDT
IVFSILKSRMRVKPTQVETVASQSRIVVRVEATRTSTINAELARLALCLQNVVVAGLPNI
NRAVIAVDDARQPPTYKLCIEGYGLRDVIATYGVVGKRTRSNNICEIYQTLGIEAARTII
MSEITEVMEGHGMSVDWRHIMLLASQMTARGEVLGITRHGLAKMRESVFNLASFEKTADH
LFDAAYYGQTDAINGVSERIILGMPACIGTGIFKLLQLHEDKQVPPIEPTICSSLNLVPS
KTT
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggagcagtttcgcgcatctgcgctgaacaaaaagatttcacatgtgcagttc
ggaatcagcggcgccgatgaaatccaacaggaggctctggtgcggattatctcgaagaat
ctgtaccaggcccagcggcagccggtgccctacggcgtcctggatcgccggatgggcatc
agcaccaaggatgccatgtgcgacacctgcggacagggcttgaacgagtgcatcggccac
tttggctacttggatctggcgctgccggtctttcacatcggccactttcgttccaccatc
aacatactgcagatgatctgcaaggtctgtgcccatgtgatgctcaagcccgaggaccgg
cagttgtacgagaagaagctgcacaacccgaacttctcgtatttgggcaagaaggcgctg
catgtgcagatgttggccaaggccaagaaggtaaccaaatgcccgcattgtggctcgcca
aatggtggcgttaagaaggggccgggtctcctgaaaatcctccacgatccgtacaaggga
cgcaaaatggacttgctcttcaccagcaacatgaacgagatgctgcactccacgcaggcg
aatcgtgacctcaactcaacgctgggcaattacagcacagccgaggagctgaccccactc
atggtgctcgacctcttcgaacagataccccagcgagatgtggccctgctgggtatgtgc
tcgcatgatgctcatccaaagcatttgattgtcacccgcgtatttgtgccgcccgcatgc
atccgtccgtcggttttgtccgaagtaaaggccggcaccacggaggacgatctgaccatg
aaacagagtgaaattctgctcatcaatgatgtaattcagcgtcacatggccaccggggga
aagatcgagctgatacacgaggattgggactttctgcaacttcatgtcgccctatatttc
cacagtgagatcagcggaatccccattaacatggctccaaagaagacgacgcgcggaatc
gtacagcgcttgaagggaaagcagggacgctttcgttgtaatctatcgggaaagagagtg
gatttcagcggacgcactgtcatttcaccagatcccaacttgatgatcaaccaggttgga
gtaccagtgcgcgtggccaagattctcacataccccgagcgcgtgaatccagccaatata
aggcacatgagggaactggtgcgcaacggaccaagcatgcacccgggcgccaactatgtg
cagcagcgaggatcgagctttaagaagtaccttgcctacggcaatcgtgagaaggtggcg
caggagctgaagtgcggcgatgtcgtggaacgacatctgcgcgacggagatatcgtgctg
tttaaccgccagccgtcgctgcacaagatgtccattatgtgccatcgggccaaagtgcag
ccgcagaggacattccgcttcaatgagtgtgcctgcacgccatacaacgccgatttcgac
ggcgatgaaatgaatctacacttgccacaaacggaggaggccagagccgaagcactcatt
ctgatgggcaaccagtcgaacctggtgacgccaaagaacggtgagattctgattgccgcc
acacaggacttcattaccggcggctatttgctcacgcaaaaggaggtctttctgaccaaa
gaggaggccatgcagttggccgcctgctttctggccaacgaagactcgacgatgcacata
aagctgccaccacccgcacttctcaagccgcgtcgtctgtggacgggcaagcaaatgttc
agcctgctaatgcgtcccaatgacgactcccaagtgcgtctcaatatggtcaacaagggt
cgcaactacacgggcaacaaggatctctgcagcaatgattcctggattcatatacgtaac
tcggagctgatgtgcggcgtcatggataaggccaccatgggttcgggcaccaaacagtgc
atcttttacttgctgctaagagactttggcgaattgcatgccaccaaggccatgtggcga
ctggcgaggatcgcatcctactttctgcagaatcgcggcttctcatttggcatcagcgac
gtaacgccgagcaagaaactgctgcagcacaaggaattgctcctgaacaatggctacgcc
aagtgtaatgagtatattgacttgctcaaggctggaaccctgcagtgccagcctggttgc
acgcccgaggagaccctggagtccgtcatgctgcgggaactgtcggccatccgagaacag
gctgccaagacatgcttcgctgagctccatcccacgaacagcgcactgataatggcgctc
agcggctcgaagggttcgaacatcaacatatcccagatgattgcgtgcgtgggacagcaa
gccattagtggcaaacgagtgcccaatgggttcgagaatcgtgcattgccccacttcgaa
aggcactctgcgatccccgcggccaggggtttcgtacagaacagtttctactccggcttg
acgccaacggagttcttcttccacacaatggctggtcgtgagggtttggtggacacagct
gtgaagaccgccgagactggttatctgcagcgacgtttggtcaagtgcctcgaggacctg
gtggtccactacgacggcacagtgcgcaatgctgtcaacgagatggtggataccatctac
ggtggcgatggcctggatcccgtgtccatggagacgcgcaacaaaccagttgatctagtc
catcagtatgacaatctgcgtgcgcagcatccgcagggcacggatcgtccacttaacgcc
gaggaaatgtctgaggctttggaaacgcttttgaaaacacctgagtttgccgaagcccgc
gacgatttcaaattggatgttcggaaccacatcaacacagtgtccaagcgtattgggcaa
ttgcagaagcgctacgagaagtgtatcaacctgtgccaccagattgagtgcctcaccacc
gagcagctgctgcagtttgtgcgccggataaatgatcgatacaatcgagctgttaccgag
cctggcacagctgtgggcgccattgctgcgcagagtattggcgagccgggcacccagatg
acgctcaagacgttccatttcgctggtgtcgcatcgatgaacatcacccagggtgtacca
cgtattgtggagattatcaatgcgacgaaaaccatatcgacgccaatcataactgccgag
ctggagaattgccatagcatggagtttgcgcgacaagtcaaggcgcgcattgagaaaacc
actttggcggagctgtcctcgtacgttgaagtcgtatgcggaccatacagctgctacctg
gcgattggtgtcgatatggccagaattaagctactcggcctacacattgatctggacaca
attgtattcagcatcctgaagtcgcgtatgcgcgtcaagccgacgcaggtggagactgtg
gccagccaatcgcgcattgtggttcgtgtggaagccacgcgaacgtcgaccataaatgca
gagttggcgcgcctagcactctgtctgcagaacgtcgtggtggcgggcctgccaaacatc
aatcgtgccgtcattgctgtcgacgatgcacggcagccgcccacctataagctgtgcatt
gagggctatggacttcgcgatgtcatcgccacgtacggtgtggtgggcaaacgcaccagg
agtaacaacatttgcgaaatctatcagacgctgggcatcgaagctgcccgaaccatcatt
atgagcgagatcaccgaggtgatggagggacacggtatgagcgtcgattggcgccacatt
atgctcctggccagccaaatgacggcgcgtggcgaggtgttgggtatcacgcgacacggc
ttggccaaaatgcgtgagagtgtcttcaatttggcatcgtttgagaagacggcggaccac
ttgttcgatgcggcatactacggccagacggatgccatcaatggggtttcggagcgcatc
atcctgggaatgccagcgtgcattggcactggcatcttcaagttgctgcaactccacgag
gacaagcaggtgccacccattgagcccaccatctgcagttccctgaacctagtgccaagc
aaaaccacataa
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