KEGG   Drosophila simulans: Dsimw501_GD20374
Entry
Dsimw501_GD20374  CDS       T01065                                 
Symbol
Dsim_GD20374
Name
(GenBank) uncharacterized protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
dsi  Drosophila simulans
Pathway
dsi03020  RNA polymerase
dsi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Dsimw501_GD20374 (Dsim_GD20374)
  09124 Replication and repair
   03420 Nucleotide excision repair
    Dsimw501_GD20374 (Dsim_GD20374)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsi03021]
    Dsimw501_GD20374 (Dsim_GD20374)
   03019 Messenger RNA biogenesis [BR:dsi03019]
    Dsimw501_GD20374 (Dsim_GD20374)
   03400 DNA repair and recombination proteins [BR:dsi03400]
    Dsimw501_GD20374 (Dsim_GD20374)
Transcription machinery [BR:dsi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Dsimw501_GD20374 (Dsim_GD20374)
Messenger RNA biogenesis [BR:dsi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dsimw501_GD20374 (Dsim_GD20374)
DNA repair and recombination proteins [BR:dsi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Dsimw501_GD20374 (Dsim_GD20374)
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-ProteinID: KMZ03460
UniProt: B4QZ40
LinkDB
Position
3R
AA seq 173 aa
MFYHISLEQEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIGSGVIQ
PGQGFVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFC
PNGNPPCYKSKDEDVVISGEDKIRLKIVGTRVDATGIFAIGTLMDDYLGLVSN
NT seq 522 nt   +upstreamnt  +downstreamnt
atgttttaccacatatcgctggagcaagagatcctgcttcatccacgttactttggcccg
caactgctggagaccgtgaagcagaaactctactccgaagtggagggcacctgcacggga
aagtacggattcgtgatagcggtaacgacgatagaccagatcggatccggtgtcatccag
ccgggccagggatttgtggtgtatccggtcaagtacaaagccatcgtctttcggccattt
aagggcgaagttctggacgcagtggtcaagcagatcaacaaagtgggcatgtttgcagag
atcggcccactgtcctgcttcatttcgcatcattctattcccgccgacatgcagttctgc
ccgaatggcaatccgccctgctacaagagtaaagatgaggatgtggttatctcgggagag
gataagattcggctgaagattgtgggcacacgagtagacgccactggaatttttgcaatt
ggcactttgatggacgactacttgggattggtgtccaactaa

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