Drosophila simulans: Dsimw501_GD21090
Help
Entry
Dsimw501_GD21090 CDS
T01065
Symbol
Dsim_GD21090
Name
(GenBank) uncharacterized protein
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
dsi
Drosophila simulans
Pathway
dsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dsimw501_GD21090 (Dsim_GD21090)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsi03019
]
Dsimw501_GD21090 (Dsim_GD21090)
Messenger RNA biogenesis [BR:
dsi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
Dsimw501_GD21090 (Dsim_GD21090)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
CSD2
Rrp44_S1
OB_HELZ2
UPA_2
OB_RNB
Dis3l2_C_term
Motif
Other DBs
NCBI-ProteinID:
KMZ05539
LinkDB
All DBs
Position
3R:19691422..19694942
Genome browser
AA seq
982 aa
AA seq
DB search
MQTLREFTRKTKRGNILKIVREHYLRDDIGCGSELCRECFQNEVYQLTSQHANQSTLFKF
PHYLVLDTNVVLDQIDVLEEDVLRNVVVLTTVLNEVKHRSSSIYKRFNEIVHDRTRNFYV
FVNEHHKETYADREPDETANDRNDRAIRLATKWYDDHLQASQSSKEFERSGKAAMRVVLL
TDDAANRAKAEAEGILVTTAAEYVKSLEDFPLLMDKLSHKTFDSEKNGLPQYPPHLSMKE
LLEGLRQNKILQGTFQASRENYLEGSVSVEKFEKGILIQGREALNRAVDGDLVAVELLPE
SEWSAPSEIVLEEKNVYADEVPSEERAKDENDMLKQVRAAASPAERTPTGRIVGIVRRKW
RQYCGILQPSLIEDTNRHIFVPADRKIPRIRIETRQAAKLQNQRIIVTIDTWPRNSRYPH
GHFVRSLGPLGDTATENEVILLEHDVPHCKFSDEVLSFLPKMPWTITDEDYSKRVDLRDL
FICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALDMEAAARGTTVYLV
GKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKSVIKSKRAMTYEEA
QSIIDDATQQNEIAKSLRHLNRLAKILKKRRMDNGALVLASPEIRFQVDSETHEPLEVEV
KQMRETNSMVEEFMLLANITVAEHIATEFSECAVLRRHPRPPPTNFDPLVKSARYQGFQV
DIESGLELSHSLDKCVKADNPYFNTMIRILTTRCMMQAVYFISGSLQKEEFFHYGLAAPI
YTHFTSPIRRYSDIMVHRLLAASIGADSTYAKLLDRKSNEELCHNLNYRHKMAQYAGRAS
VALNTHLFFRGKEEDEEGYVLFVRKNALQVLIPKYGLEGTLYLKTDKDGKDGQERVKSEI
VFTFNEEDHTQRCGDVVFHSFDPVTVRLSLDSSNVQHEKLIFRLVKPYIKGFSVETASKG
TEGQEVAAAPPSKKSKKDKKKK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactttacgcgaatttacgcgtaaaacgaagcgcggcaacatcctgaagattgtg
cgggagcactatctgcgcgacgacatcggctgcggctccgaactgtgccgggagtgcttc
caaaacgaggtataccagctcacctcgcagcacgcgaatcagagcaccctcttcaaattc
ccgcactacctcgttttggacacgaatgtggttctggaccagatcgacgtgctggaggag
gatgttttgcgcaacgtagtcgtcctgaccaccgtgctcaacgaagtgaagcacaggagc
tcctccatttacaagcggttcaatgagatcgtccacgaccgcaccagaaacttttatgtg
ttcgtcaacgagcaccacaaggaaacctatgctgatcgcgaaccagatgagaccgctaat
gatcgcaatgatcgggccattcggctggccaccaagtggtacgatgaccacctgcaggcc
tcgcaatcctctaaagagttcgagcgcagtggcaaagctgctatgcgggttgtcctgctc
acagatgatgctgccaatcgtgctaaggccgaggcagaaggtattctggtgaccacagcc
gcggagtacgtgaaatctctcgaggattttccacttctgatggataagctgtcgcacaaa
acattcgacagcgagaaaaatggtctgccccagtacccgccgcatctcagcatgaaggag
ctgctggaaggactgcgccaaaataagatactacagggcacttttcaggcatccagggag
aactacttggagggcagcgtcagtgtagagaaatttgaaaagggtatccttatccaaggc
cgcgaggctcttaatcgggccgtggatggcgacctggtggccgtggagctgttgcccgaa
tcggagtggtcagcgcccagtgaaattgtactggaggagaagaatgtctatgccgatgaa
gtgcccagcgaggaaagggccaaggatgaaaatgacatgttgaagcaggtgcgtgccgct
gcctcacccgcagagcgcacgcccacagggcgaattgtcggtattgtgcgacggaagtgg
cgacagtattgcggcatcctacagcctagcttaatagaggatacaaatcggcacatcttt
gtgcccgccgaccgaaagattccgcgcatccgtatagaaacgcgacaggcggcaaagctg
cagaaccagcgcatcatcgtaacgattgacacatggccgcgcaactcgcgctacccacat
ggacactttgtgcgctcccttgggccgctcggagacacggccaccgagaacgaggttatc
ctgctagagcacgacgtcccgcactgcaagttctcggacgaagtgcttagcttcttgccg
aaaatgccttggacaattactgacgaggactactccaagcgtgtggatctgagggatctg
ttcatttgctctgtggatcccccgggctgcacggatatcgatgatgctttgcactgcaga
gaactgcccaacggcaatctggaagtgggcgttcacatcgccgacgtgagtcactttatc
cggccaggaaacgcactggacatggaggcagcggccaggggaaccaccgtatacctggtg
ggcaaacgaatcgacatggtacccgagttactcagctcaaatctctgctcattggttggc
ggcgttgagcgattcgccttctcctgcgtgtgggaagtggacaacgaggcaaatgtgtta
agcaaacgcttccacaagagcgtcatcaaatcgaagcgtgccatgacctacgaggaagcg
cagagtatcatcgacgatgccacgcaacagaatgaaatagccaagtccctgagacatctt
aaccggttggccaaaatactaaaaaaacgacgaatggataatggagcccttgtccttgcc
tcgccggagatccgcttccaggtggacagcgagacacacgaaccactcgaggtggaggtg
aagcagatgcgggagacgaattcaatggtggaggagttcatgttgctggccaacatcaca
gtggccgagcatatcgcgacggagttctccgagtgtgctgttctgcgtcgccatcctcgg
ccaccgcctaccaatttcgatccgctggtaaagtctgcgcgctaccagggcttccaggtg
gacatcgaatcagggctggagctgtcgcattcactggataagtgtgtcaaggcggacaat
ccgtactttaacacgatgatccgcatcctcaccacacgctgtatgatgcaggcagtgtac
ttcatcagcggcagtctgcagaaggaggagttcttccactacggtctggctgctcccatc
tacacgcactttacgtctcccattcgtcgttactccgacatcatggtacatcgcctgctg
gccgcctcaatcggcgcggatagcacctatgccaagctattggaccgaaagtcaaatgag
gagctgtgtcataatcttaactaccgccacaaaatggctcagtacgctggtcgcgcatcg
gtggccctcaacacgcatctatttttccgcggcaaggaggaggatgaggaaggatatgtg
ctatttgtgcgcaagaatgctctgcaagtgctaatccccaagtatggcctggaaggcacc
ctgtatctgaagacggacaaggatggcaaggacggtcaggagcgcgtcaagagcgagatt
gtcttcaccttcaacgaagaggatcatacacagcgttgcggggatgtggtgttccactcc
tttgatcctgtcaccgttcgccttagcctggattccagcaatgtgcagcacgagaagctg
atcttccggctggtcaagccatacatcaagggcttcagcgtggaaacggctagcaaagga
actgagggtcaggaggttgctgcggcacctccctcgaaaaagtccaaaaaggataagaaa
aagaaataa
DBGET
integrated database retrieval system