KEGG   Drosophila simulans: Dsimw501_GD22262
Entry
Dsimw501_GD22262  CDS       T01065                                 
Symbol
Dsim_GD22262
Name
(GenBank) uncharacterized protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
dsi  Drosophila simulans
Pathway
dsi03018  RNA degradation
dsi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dsimw501_GD22262 (Dsim_GD22262)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dsimw501_GD22262 (Dsim_GD22262)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsi03019]
    Dsimw501_GD22262 (Dsim_GD22262)
   03041 Spliceosome [BR:dsi03041]
    Dsimw501_GD22262 (Dsim_GD22262)
Messenger RNA biogenesis [BR:dsi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Dsimw501_GD22262 (Dsim_GD22262)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     Dsimw501_GD22262 (Dsim_GD22262)
Spliceosome [BR:dsi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    Dsimw501_GD22262 (Dsim_GD22262)
SSDB
Motif
Pfam: LSM GRP
Other DBs
NCBI-ProteinID: KMY89528
UniProt: B4Q990
LinkDB
Position
2L
AA seq 154 aa
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDAQAKSRNRTEMNKNRGGNSSQNQRGGRQGGGNRNNVGN
RPGQGYGGAANNAMRLGGAAGQGNRLPHAAKNRK
NT seq 465 nt   +upstreamnt  +downstreamnt
atgctgccactttcacttttaaaaacagcacagagccatcccatgttggtggagctgaaa
aatggtgaaacatacaatggtcatctagtcagttgcgactcgtggatgaatattaatctg
cgcgatgttatttgcacctcaaaggatggcgatcggttttggcgcatgcccgaatgttat
atccgcgggagcaccatcaaatatctgcgaattccagacgaagtaatcgacatggtcaag
gaggacgcgcaggccaagtcgaggaatcgcacagagatgaacaaaaaccgcggcggcaac
tcgtcgcaaaatcagcgcggcggacgtcagggtggcggcaaccgcaacaatgtcggcaat
cgtcctggccagggatacggaggtgctgctaacaacgcgatgcgcctgggtggcgctgct
ggccaagggaaccgtctgccccacgccgccaaaaataggaaatag

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