KEGG   Drosophila simulans: Dsimw501_GD25033
Entry
Dsimw501_GD25033  CDS       T01065                                 
Symbol
Dsim_GD25033
Name
(GenBank) uncharacterized protein
  KO
K03679  exosome complex component RRP4
Organism
dsi  Drosophila simulans
Pathway
dsi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dsimw501_GD25033 (Dsim_GD25033)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsi03019]
    Dsimw501_GD25033 (Dsim_GD25033)
Messenger RNA biogenesis [BR:dsi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Dsimw501_GD25033 (Dsim_GD25033)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     Dsimw501_GD25033 (Dsim_GD25033)
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N ECR1_N_2
Other DBs
NCBI-ProteinID: KMY96058
UniProt: B4QIR6
LinkDB
Position
2R
AA seq 298 aa
MSTNAAIDLALDRVDWRDLAAQTEEQPRVYTPGEVLMPEAGFMRGHGTFVEDENIKSSVA
GVIQKVNKLISVRPLKSRYVGEIGDVVVARVSEVQQKRWRVDTNSRLDSILLLSSVNLPG
GELRRRSAEDEQMMRRYLDEGDLISAEVQNIFEEGSLSLYTRSLKYGKLSQGILVKVFPA
LVKRRKMHFHNLPCGASVILGNNGYIWISPTKGQEEEGGEGGFAQNLNEHVPRGEREVIA
RLRNSILALAKCKLMIYDTSIQYAYEESLRYEAHELLQQNAIYDIGQQTQARLRDADE
NT seq 897 nt   +upstreamnt  +downstreamnt
atgtccaccaacgcagcgatagatctggccctggaccgggtggactggcgcgacctggcc
gcgcagacggaggaacagccgagggtgtatacgccgggcgaagtgctgatgccggaggcg
ggattcatgcgtggccacggaaccttcgtcgaggacgagaacatcaagtcttcggtggcc
ggggtgatccagaaggtcaacaagctgatctcggtgcgcccgctcaagagtcgctatgtg
ggcgagatcggggacgtggtggtggcccgcgtcagcgaggtgcaacagaagcgctggcga
gtggacaccaattcccggctcgactccatcctcctgctctcctctgtgaatctgccgggc
ggagaactccggcggagatcggcggaggacgagcagatgatgcgacggtacttggacgag
ggcgatctcatctccgccgaagtccagaacatcttcgaggagggctccctttcgctgtac
acgcgcagcttgaagtacggaaagctgtcgcagggcatcctggtcaaggtgttccccgct
ctcgtcaagcgccgcaagatgcacttccacaatctgccctgcggcgcctccgtgatcctg
ggcaacaatggctacatctggatatcgccgaccaagggccaggaggaggagggcggcgag
ggaggattcgcccagaacctgaacgagcatgtgccgcgcggggagcgggaggtgatcgcc
cggctgaggaactccatcctcgcgctggccaagtgcaagctgatgatctacgacaccagc
atccagtacgcctacgaggagtccctgcgctacgaggcccacgagctgctccagcagaac
gccatctacgacatcggccagcagacgcaggctcggctgagggacgcggacgagtag

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