KEGG   Drosophila simulans: Dsimw501_GD27798
Entry
Dsimw501_GD27798  CDS       T01065                                 
Symbol
Dsim_GD27798
Name
(GenBank) uncharacterized protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
dsi  Drosophila simulans
Pathway
dsi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Dsimw501_GD27798 (Dsim_GD27798)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsi03021]
    Dsimw501_GD27798 (Dsim_GD27798)
   03019 Messenger RNA biogenesis [BR:dsi03019]
    Dsimw501_GD27798 (Dsim_GD27798)
Transcription machinery [BR:dsi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     Dsimw501_GD27798 (Dsim_GD27798)
Messenger RNA biogenesis [BR:dsi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     Dsimw501_GD27798 (Dsim_GD27798)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCHC zf-CCCH_3 Torus zf-CCCH_2 zf-CCCH_4 Nab2-like_zf-CCCH_ zf-CCHC_3
Other DBs
NCBI-ProteinID: KMY87374
UniProt: A0A0J9QUA0
LinkDB
Position
2L
AA seq 296 aa
MDILLANVSGLQFKAERDLIEQVGAIPLPFYGMDKSIAAVCNFITRNGQECDKGSACPFR
HIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQ
SKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMDYLAGFCPEGPSCKHMHPHFELPPLAELG
KDQLHKKLPTCHYCGELGHKANSCKQYVGSLEHRNNINAMDHSGGHSGGYSGHSGHNEGA
EDMQSNHHSQPHGPGFVKVPTPLEEITCYKCGNKGHYANKCPKGHLAFLSNQHSHK
NT seq 891 nt   +upstreamnt  +downstreamnt
atggacatccttttggccaacgtgagtgggctgcagttcaaggctgagcgggacctcatc
gagcaggtgggcgccatcccgctgccgttctacggcatggacaagtccatcgcggcggtc
tgcaatttcatcaccaggaacgggcaggagtgcgacaaagggagcgcctgtcccttccga
cacattcgcggcgacaggacgatcgtgtgcaagcactggctgagaggactgtgcaagaag
ggcgaccagtgcgagttcctgcacgagtatgacatgaccaagatgcccgagtgctacttc
tactcgaggttcaacgcctgccacaacaaagagtgcccctttctgcacatcgacccgcag
agcaaggttaaggactgtccctggtacaagagaggcttctgccgccacggtccccactgc
cggcaccagcatctgcgccgtgtcctgtgcatggactacctggccggcttctgccccgag
ggcccgtcctgcaagcacatgcatccccacttcgagctgcccccactggcggaactgggt
aaggatcagctgcacaagaaactgcccacgtgccactattgcggcgaactgggccacaag
gccaactcgtgcaagcagtatgtgggcagcctggagcaccgcaacaatatcaacgctatg
gatcactccggcggacactcgggcggctactctggacactccggccacaatgagggcgcc
gaagacatgcaatccaatcaccacagtcagccgcatggtcccggcttcgtcaaggtgccc
acgcccctggaggagatcacctgctacaagtgcgggaacaaggggcactacgcgaacaag
tgtcccaagggccacctcgccttcctctccaaccaacatagtcataagtag

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