Drosophila simulans: Dsimw501_GD29579
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Entry
Dsimw501_GD29579 CDS
T01065
Symbol
Dsim_GD29579
Name
(GenBank) uncharacterized protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dsi
Drosophila simulans
Pathway
dsi03013
Nucleocytoplasmic transport
dsi03015
mRNA surveillance pathway
dsi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dsimw501_GD29579 (Dsim_GD29579)
09122 Translation
03013 Nucleocytoplasmic transport
Dsimw501_GD29579 (Dsim_GD29579)
03015 mRNA surveillance pathway
Dsimw501_GD29579 (Dsim_GD29579)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsi03019
]
Dsimw501_GD29579 (Dsim_GD29579)
03041 Spliceosome [BR:
dsi03041
]
Dsimw501_GD29579 (Dsim_GD29579)
03009 Ribosome biogenesis [BR:
dsi03009
]
Dsimw501_GD29579 (Dsim_GD29579)
03012 Translation factors [BR:
dsi03012
]
Dsimw501_GD29579 (Dsim_GD29579)
Enzymes [BR:
dsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dsimw501_GD29579 (Dsim_GD29579)
Messenger RNA biogenesis [BR:
dsi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Dsimw501_GD29579 (Dsim_GD29579)
mRNA cycle factors
Stress granule specific factors
Dsimw501_GD29579 (Dsim_GD29579)
Spliceosome [BR:
dsi03041
]
Complex C
Other components
EJC/TREX
Dsimw501_GD29579 (Dsim_GD29579)
Ribosome biogenesis [BR:
dsi03009
]
Eukaryotic type
90S particles
Helicases
Dsimw501_GD29579 (Dsim_GD29579)
Translation factors [BR:
dsi03012
]
Eukaryotic type
Initiation factors
eIF-4
Dsimw501_GD29579 (Dsim_GD29579)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
TniB
UvrD-helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
KMZ04911
LinkDB
All DBs
Position
3R
Genome browser
AA seq
399 aa
AA seq
DB search
MARKNAQAEDLSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPI
VKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDM
MNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEM
LNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIK
QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP
QKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG
RKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagaatgcccaggcggaggacctctcgaacgtggagttcgagacgagcgag
gatgtggaggtgatacccacattcaacgccatgaatcttaaggaggagctgctacgcggc
atctacgcgtacggcttcgagaaaccctcggccattcagcaaaggagcattacgcctatc
gtcaagggacgggatgtgattgcccaggcacaatcaggcacgggcaaaaccgccaccttc
tccatctccattctgcagagcctggacaccacgctgcgggagacgcaggttctgtgcctg
tcgcccactcgcgagttggctgtgcaaatccagaaagtcattctcgccctcggcgacatg
atgaatgtccagtgccatgtgtgcatcggtggcaccaacctgggcgaggatatccgcaaa
ctggactacggtcagcacattgtgagcggcactccaggacgagtgttcgacatgatcaag
cgacgggtgctgcgaacaagagccatcaagatgctagtgctggacgaagctgacgagatg
cttaataaggggttcaaggaacagatatacgatgtgtatcgctacttgccaccagccacc
caggtggtgctcatctcggctaccttgccccacgagatactcgagatgacctccaaattc
atgacagatcccattcgcatcttggtcaagcgtgacgaattgacgctggaaggcatcaag
cagttcttcgtcgccgtggagcgcgaggaatggaaattcgataccctgtgcgatctgtac
gatactctgaccatcacccaggccgtcatcttctgcaacacgaaacgcaaggtggactgg
ctgacggagaagatgcgggaggctaactttacagtcagctcgatgcacggcgatatgccg
caaaaggagcgtgacgagatcatgaaggagttccgagccggccagtcgcgagtgctcatc
accaccgatgtgtgggctcgtggtatcgatgtgcagcaggtgtcgctggtcatcaactac
gatttgcccaacaaccgtgagctgtacatccatcgcatcggtcgttctggtcgtttcgga
cgcaagggtgttgctattaactttgtcaaatcggacgatatccgcatcctgcgcgacatt
gagcagtactactccacacaaatcgacgagatgcccatgaacgtggctgacttgatctaa
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