Drosophila simulans: Dsimw501_GD29621
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Entry
Dsimw501_GD29621 CDS
T01065
Symbol
Dsim_GD29621
Name
(GenBank) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dsi
Drosophila simulans
Pathway
dsi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dsimw501_GD29621 (Dsim_GD29621)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsi03019
]
Dsimw501_GD29621 (Dsim_GD29621)
03041 Spliceosome [BR:
dsi03041
]
Dsimw501_GD29621 (Dsim_GD29621)
Messenger RNA biogenesis [BR:
dsi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Dsimw501_GD29621 (Dsim_GD29621)
Spliceosome [BR:
dsi03041
]
Complex B
Other components
Prp19-related factors
Dsimw501_GD29621 (Dsim_GD29621)
Complex C
Dsimw501_GD29621 (Dsim_GD29621)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
Mad3_BUB1_I
TPR_15
TPR_8
TPR_12
RPN7
PPR
ARM_TT21_C
DHR-2_Lobe_A
TPR_10
Motif
Other DBs
NCBI-ProteinID:
KMY93546
UniProt:
A0A0J9RC34
LinkDB
All DBs
Position
2R
Genome browser
AA seq
883 aa
AA seq
DB search
MVTKTIKSLNLEINFEVEDVPYEEEILRNAYSVKHWLRYIDHKAKAPNNGVNMVYERALK
ELPGSYKIWHNYLRTRRKQVRGKIPTDPMYEEVNSAFERALVFMHKMPRIWMDYGAFMTS
QCKVTRTRHVFDRALRALPITQHGRIWPLYLKFVRRFEMPETALRVYRRYLKLFPEDTEE
YVDYLQEADRLDEAAQQLAHIVDNEHFVSKHGKSNHQLWNELCDLISKNPHKVHSLNVDA
IIRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQF
EELSLNKRMEQVKLSAAATEEDDIDVELRLSRFEYLMERRLLLLNSVLLRQNPHNVHEWH
KRVTLYEDKPAEIISTYTEAVQTVQPKQAVGKLHTLWVEFAKFYEANGQVEDARVVFERG
TEVEYVKVEDLAAVWCEWAEMELRQQQFEAALKLMQRATAMPKRKIAYYDDTETVQARLH
RSLKVWSMYADLEESFGTFKTCKAVYERIIDLKICTPQIIINYGMFLEEHNYFEEAYRAY
EKGISLFKWPNVYDIWNSYLTKFLERYGGTKLERARDLFEQCLDQCPPEHAKYFYLLYAK
LEEEHGLARHAMSVYDRATSAVKEEEMFDMYNIFVKKAAEIYGLPRTREIYEKAIESLPE
QNMRHMCVKFAELETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKEFEVRHGNEDTMR
EMLRIKRSVQATYNTQVNMMAAQFLSTNNGAAADAGAGAGPDAMRLLEEKARQAAVEAKQ
KPIEKAASNIMFVRGETQGGAKNKQDTVVNPDEIDIGDSDEDDEEEDGDEENEMTNDNQA
SAAATKTDEEGLVMKKLRFEQKAIPAKVFGSLKPSNQGDSDGE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggtgacaaaaacgattaaatctctgaatttggagatcaatttcgaagtggaggatgtt
ccgtatgaggaggaaatccttcggaacgcctactccgtaaaacattggctgcgctacatt
gatcacaaagcgaaagcgccgaataatggtgttaatatggtctacgagcgtgctcttaag
gagcttcctggcagctataagatctggcacaattatctgagaacccgcaggaagcaggtg
cgcggcaagatacccacggatcccatgtacgaggaggtcaacagtgccttcgagcgcgca
ctcgtctttatgcacaaaatgccacgtatctggatggactacggtgccttcatgacctcc
cagtgcaaggtgacccgcacccggcatgttttcgatcgagctctaagggctctgcccatc
acgcagcacggcaggatttggccactgtatctgaagtttgtacgccgctttgaaatgccg
gaaacagcactacgagtctaccgtcgatatttgaaactcttccccgaagacacagaggag
tatgtggactacctgcaagaagcagatcggctggacgaagctgcccagcagctggcgcac
atcgtcgacaatgaacacttcgtttccaagcacggcaagtccaatcatcagctgtggaac
gaactgtgcgacctcatctcgaagaatccacacaaggtgcactccttgaatgtggacgcc
atcattcgcggtggactgcgtcgctacaccgatcagctgggccacctgtggaactccctg
gcggattactatgtgcgttccggcttatttgatcgggcaagagatatatacgaggaagcc
attcaaactgtgaccaccgtaagagacttcacccaagtctttgatgaatacgcacagttc
gaggaactctcgctgaacaaacgcatggaacaggtcaaactaagcgcggcggccaccgag
gaggatgacattgacgtcgaactgcggctctcgcgcttcgaatacctcatggagcgccgt
ttgctgctgttgaatagtgtgctcctgcgccagaatccgcacaacgtgcacgagtggcac
aagcgggtgacactgtacgaggacaagcccgccgagatcatcagtacgtacaccgaggcc
gtgcaaacagtgcagccgaagcaggcggtcggcaagctgcacaccctctgggtggaattc
gccaagttctacgaggccaacggacaggtggaggatgctcgtgtggtcttcgaacgcggc
actgaggttgagtatgtcaaagtagaggatttggcagcggtgtggtgcgaatgggcagag
atggagctacggcagcagcagttcgaggcggcactcaagctgatgcaaagggcgacggcc
atgccgaagcgaaagattgcctattatgatgatacggagacggtgcaggcgcgccttcat
cgctcgctaaaagtgtggtccatgtacgctgacttggaggagtcatttggcaccttcaag
acctgcaaagccgtctacgagcggattatcgacctgaagatctgtacgccacagatcatt
atcaattacggaatgttcctcgaggagcacaactactttgaggaagcctaccgagcctat
gagaagggcatctctctgttcaagtggcccaatgtctacgacatctggaactcttaccta
accaaatttttggagcgttatggcggcacaaaactggaacgagccagggatctcttcgag
cagtgcctggatcagtgtcctcctgagcatgctaagtacttttatttactgtatgctaag
ttggaagaggagcacggtctcgcccggcatgccatgtcggtctatgatcgcgccacgtct
gctgtaaaggaggaggagatgttcgacatgtacaacatatttgtgaagaaggcagccgag
atctatggcctgccacgtacccgcgagatctatgaaaaggccattgaatcgctgcccgag
cagaatatgcgccacatgtgcgtcaagttcgcagagttggaaacgaagttgggcgaagtc
gatcgagctagggccatctatgctcattgctcacaggtttgtgatccccgcatcactgca
gacttttggcaaacctggaaggagttcgaagtgcgtcacggcaacgaagacacaatgcgc
gaaatgctgcgcatcaagcgctccgtgcaggccacttacaatacgcaggtgaacatgatg
gccgcccaattcctgagcacaaacaacggagcggctgcggatgccggcgcaggagctgga
ccggatgccatgcggctgctggaggagaaagctcgccaggcggcagtcgaggccaaacag
aagcccatcgagaaggcggcctcaaacattatgtttgtgcgcggtgagacgcagggtggt
gctaagaataaacaggatacggtcgtcaatcctgatgagatcgacattggagacagcgac
gaagacgatgaggaggaggacggcgatgaggagaacgagatgacgaacgataaccaggcc
agtgcagcggccacgaaaaccgacgaggaaggcctggtcatgaagaaactgcgcttcgag
caaaaggccattccagccaaggtcttcggcagcctcaagccatcaaatcaaggcgactct
gatggagagtaa
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