Dactylococcopsis salina: Dacsa_0145
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Entry
Dacsa_0145 CDS
T02378
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dsl
Dactylococcopsis salina
Brite
KEGG Orthology (KO) [BR:
dsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsl03016
]
Dacsa_0145
Enzymes [BR:
dsl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dacsa_0145
Transfer RNA biogenesis [BR:
dsl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dacsa_0145
Prokaryotic type
Dacsa_0145
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
DUF7485
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AFZ48960
UniProt:
K9YRH6
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All DBs
Position
complement(149807..150721)
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AA seq
304 aa
AA seq
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MITETAFTNQPLMGFINIDKPIDVTSHDCVAKVRRWAKMKRVGHGGTLDPAATGVLPLAV
GKATRLLQFLPNGKAYQATIRLGWRTSSDDLEGEIIEQTSASHLTLDQVKPHLQQFLGKI
IQIPPVYSAIQKDGKRLYELARQGKSVDVPPREVEIDQIEILNWQGGEFPELTLEIRCKS
GTYIRSIARDLGKAVGTGGTLSALRRTKSSGFSLEDSFTLPNLETELRDGKFTPLPLDYP
LQHLERIDLDSNQARRWCQGQFVVLSTASDRPSFLRVYREDGLFLGVGEKVPPEILKPKT
VMEA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgatcactgaaactgcttttacgaatcagcctttaatgggctttattaatatagataag
ccgatcgatgtcacttcccatgactgtgtagcgaaagtgagacgttgggcgaaaatgaaa
cgagtgggacatggtggtactcttgatcccgcagctactggcgttttacccctagcggtg
ggaaaagcgactcgtttattacaatttcttccgaatggaaaagcctatcaggcaacgatt
cgtttgggttggcgtaccagtagcgacgatttagaaggagagatcattgaacaaacttca
gcttctcatctcaccttagatcaggttaaacctcatttacagcagtttttagggaaaatt
atccaaattccacccgtttacagtgcgattcaaaaagatggaaaacgattgtatgaactc
gccagacaaggaaaatccgttgatgttccgccgcgagaggtagaaattgatcagattgaa
atcttaaactggcaggggggagagtttccagaactcacgcttgagattcgttgcaaaagt
gggacttacattcgatcgatcgcgcgagatttaggaaaagcggtgggaacgggtggcaca
ttatccgcattaagacgaactaaaagcagtggtttctctttagaggatagtttcacactc
cctaatttagaaaccgaactcagagacggaaaatttacgccgcttcccctagactatccg
ttacagcatttagaaagaattgatttagactccaaccaagcccgacgttggtgtcaagga
caatttgttgtgttatcaaccgccagcgatcgccctagttttctacgagtctatcgggaa
gatggtttatttttaggggttggggaaaaagttccccccgaaattttaaaaccgaaaact
gttatggaagcgtga
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