Dactylococcopsis salina: Dacsa_0461
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Entry
Dacsa_0461 CDS
T02378
Name
(GenBank) superfamily II RNA helicase
Organism
dsl
Dactylococcopsis salina
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
nSTAND3
ATPase_2
MTR4_beta-barrel
DUF2937
DUF3516
IstB_IS21
nSTAND_NTPase5
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFZ49248
UniProt:
K9YT38
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Position
476851..479505
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AA seq
884 aa
AA seq
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MSVSSTELDLKTLFPFELDNFQVRAITALDAKKSVVVSVPTGSGKTLVGEYAIHRALAKG
KRVFYTTPLKALSNQKLRDFQETFGEEQVGLLTGDVSVNRDAGVVVMTTEIFRNMLYGTS
IGEVGTSLENVEAVVLDECHYMNDPNRGTVWEESIIYCPKSIQLVALSATIANAGQLTDW
INEIHGPTELIKSDFRPVPLEFYFSTLKGLFPLLNEQKTKMNSRLKPKQKGRKIRISKSD
CPTIDLVVEQLATRELLPAIYFIFSRRGCDQSVQQLNRLSLVTPEEKAQIQEHLQRFLAQ
HPEGARSGQIEPLKRGVASHHAGVLPAWKGLVEELFTRGLVKVVFATETLAAGVNMPART
TVISSLSKRTDQGHRLLRASEFLQMSGRAGRRGMDQRGNVVCVQTRFEGAKEAAYLATRE
SDPLVSQFTPTYGMVLNLLQRQTIQEAKSLLQRSFAQYLANLKLIPEQKAIAQLTQEIAR
IDVQIAPIPRAYFNQYEKLQAHLKEEKRILKYLDKQAQRDRTPALSAAISQLRSGDLLFL
KGKYVTVSSPLPAVLVQTTGSPGQSSLLICLAADNRWYVATERDVSAIGEVLLPESYFSS
IDLPPDLEIKPGKRRKGDEITAEIAQRMEEVEIPDTDAPEVAAQKEKIKDIQQRMSSHPL
QQWGQPKQLLKTYSRRQQLEEELERHQANTRENQSQHWREFLDICEVLETFGALEKYQPT
SLGQTAAAIRGDNELWLGLALRSGHFDELSPAYLAAACSALITETPRPDSESDFPPPMPV
INALSELRGIRRELFQVQRRNRVAIPLWLEPDLIGLVEQWVEGIEWQDLCDATSLDEGDL
VRILRRSRDFLSQIPHVPYLPNVLAMNARLAVEQMERFPVQEFE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtttcttccacagaattagatttaaaaacgctttttccctttgagttagataac
tttcaagttcgcgccattactgcattagatgccaaaaaatcagtggtggtttctgttccc
accggttcagggaaaaccttagtgggagaatatgccattcaccgcgcactcgccaagggg
aaacgagtattttacacgacaccattaaaagcactgtctaaccaaaaattgcgagacttt
caagaaacatttggagaggaacaagtggggctactcacaggagatgtttccgttaaccgt
gatgcgggagttgtcgtgatgactacagaaattttccgcaatatgctttatggaacatcg
atcggagaggtgggaacctctttggaaaatgtggaagcagtggtgttagatgaatgtcac
tacatgaatgatccgaatcgagggacggtttgggaagagtcaattatttactgtccgaaa
agcattcaattagtcgccctttctgcaaccattgctaatgcgggacaactgaccgattgg
attaatgaaattcacggtcccactgagttgattaaatccgattttcgtccagttcctctg
gagttttactttagcacacttaagggactgttcccattgctcaatgaacagaaaactaaa
atgaacagtcgcttgaaacccaagcaaaaaggacgtaaaattcgcatcagtaaatcggat
tgtccgacgatcgatcttgtggttgaacaattagcaacaagagaactgctccccgccatc
tattttatttttagtcggcgcggttgtgatcaatcagtacaacaactgaatcgcttatct
ttagtgactcccgaagaaaaagcacaaattcaagaacatctccaacgatttttagcacag
catccagaaggagcaagatcaggacaaattgaaccgttaaaacggggagtcgcttctcat
catgcaggggtactacccgcatggaaagggttggtagaagagttatttactcgtggtttg
gtgaaggtggtatttgccacagaaaccctcgccgctggggtgaatatgccagcgcgaacc
actgtgatttcctcgttatcgaaacgaacggatcaaggacatcgcttgttgcgagcttcc
gagtttctacaaatgtctggacgagccggacgtagaggaatggatcaacgggggaatgtg
gtttgtgtgcaaactcgctttgaaggagcaaaagaagcggcgtatttagcgacgagagag
tctgatccgctagtgagtcagtttacgccgacttatgggatggtgttgaatttattacaa
cgacagacgattcaggaggcgaagtcgttgttacaacggagttttgctcagtatttggca
aatctaaagttaattccagaacaaaaggcgatcgcgcagttgacgcaagagattgctcgg
attgatgtccaaattgcaccaattccgagggcgtactttaatcaatacgaaaaactacaa
gcacatcttaaggaagagaaacggattctgaagtatttagacaaacaagcacagcgcgat
cgaactcctgctttaagtgcagccatatcacagttgcgatcgggcgatcttttattcttg
aaaggaaagtatgtaacagtttcttctcctcttcctgcggttttagtgcaaacaacaggc
tctcctggtcaatcctcccttttaatttgtttagcggcggataatcgttggtatgtcgcc
acagaacgggatgtgagcgcgatcggggaagttttactaccagaatcttatttttcctcg
atcgatctaccgccagacttagaaatcaaaccaggaaaacgccgtaaaggagacgaaatc
actgccgaaattgctcaaagaatggaagaggttgagattcccgacacagatgcaccagaa
gtcgccgcccagaaggagaaaattaaagacattcaacagcgcatgagtagccatccgcta
cagcaatggggacaaccgaaacaactgttgaaaacttacagccgtcgtcaacaactagag
gaagagttagaaagacaccaagccaacacgagagaaaatcaatctcaacactggcgagag
tttttggatatctgtgaagtgttggaaacctttggcgctttagaaaagtatcaacccacc
tctctcggacaaacggcggcggcaattcgtggcgataatgaattatggctcggtttagcg
cttcgatcgggtcattttgatgaattgtcccctgcttatttagcagctgcttgttccgca
ttaattacggaaaccccacgtcccgatagtgaaagtgatttcccgccaccgatgccagtg
attaacgccttgagtgaattacggggaatacgacgcgagttatttcaagtacaaagacgg
aatcgagtcgcgattcctttgtggttagaacccgatttaattggtttagtggaacaatgg
gttgaggggatcgaatggcaggacttgtgtgatgctaccagtttggatgagggagattta
gtgagaattttgcgtcgatcgcgcgattttctctctcagattcctcatgttccctattta
cccaatgtcttggcgatgaacgctcgtttagccgtagaacaaatggaacgcttccccgtg
caagaatttgaataa
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