Dactylococcopsis salina: Dacsa_0621
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Entry
Dacsa_0621 CDS
T02378
Name
(GenBank) DNA-directed RNA polymerase, gamma subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dsl
Dactylococcopsis salina
Pathway
dsl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dacsa_0621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsl03021
]
Dacsa_0621
03400 DNA repair and recombination proteins [BR:
dsl03400
]
Dacsa_0621
Enzymes [BR:
dsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dacsa_0621
Transcription machinery [BR:
dsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dacsa_0621
DNA repair and recombination proteins [BR:
dsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dacsa_0621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AFZ49395
UniProt:
K9YSS4
LinkDB
All DBs
Position
complement(639852..641741)
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AA seq
629 aa
AA seq
DB search
MAQSKQEFDYVKINIAAPDRIREWGERNLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAAVTHVWYLKGI
PSYLSILLDMALRDVEQIVYFNSYVVLEPGNAGNLSYKQLLTEEQWMEIEDQLYAEDTEL
MGVEVGIGAEAIQRLLEDLNLEEEAEKLREEVSNAKGQKRAKLIKRLRIIDHFIATGSSP
DWMILTYIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQDILAPEIIVRN
EKRMLQEAVDALIDNGRRGRMVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPNLKIYQCGLPREMAIELFQPFVIHRLIRNGVVSNIKSAKKKIQHNDPEIWEVLEE
VITGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
ESQSEARLLMLASHNILSPATGTPIVAPSQDMVLGTYYLTAENATVEPQDKRYFSNLEDV
ICAYQQGHLNLHAYIWVRFEGEVRDPVEAEPVEEETREDGTVLKVYPNRRVKENADGEVV
AQYIRTTAGRVIYNKTIHDALLGSSVVNV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcaaagcaagagtttgattacgttaaaattaatatcgcagcgcccgatcgc
atccgtgaatggggagagcgcaacctcccgaacggtcaagtagtgggagaagtaaccaaa
cccgaaaccattaactatcgcaccctgaaaccagaaatggacgggttgttttgcgagcgc
atcttcggtccggcgaaagattgggaatgtcactgcggcaaatataaacgagtgcgtcat
cgtgggattgtttgcgaacgctgtggggtagaagttaccgagtcgagagtgcgtcgtcat
cgcatgggatatattaagctggcagcggcggtaactcatgtttggtacttaaaagggatt
cccagttatttgagcatccttttagacatggcgttacgggatgtggagcaaattgtttac
tttaactcctatgtggtgttagaaccgggcaatgcggggaatttaagctataaacaactg
ttgaccgaagaacagtggatggaaattgaagatcaactctatgctgaagatacagagttg
atgggagtggaagttggcattggcgctgaagccatccaacgtttattagaagacctcaat
ttggaggaagaagcagaaaaactacgggaagaagtttctaatgccaaaggacaaaaacga
gcgaaactgattaaacggttacgcattatcgaccattttatcgccactgggtcttctcca
gactggatgattttaacctatatccccgtgattcccccagatttacgtccgatggtgcaa
ttagacggtggacgctttgcgacttctgacctcaatgatctctatcgacgggtgattaat
cgcaataatcgtcttgcccgtttacaggatattctcgcgccagagatcatcgttcggaat
gagaaacggatgttacaagaagccgtagatgcgttaattgataacggtcgtcgcggccga
atggttgtgggcgcaaataatcgtcccttgaagtctttgtcggatattattgaagggaaa
caaggtcggttccgacaaaacctgttaggaaaacgggtggattattcgggaagaagcgtg
attgtcgttggtccgaacttgaaaatctatcagtgtggcttaccacgagaaatggcgatc
gagcttttccagccttttgtgattcaccgcttgatccgtaatggagtggttagcaacatt
aaatcagcaaagaaaaagattcaacacaacgatccagaaatctgggaagtgttggaagaa
gtgatcacgggacatcccgttatgctgaaccgcgctcccaccttgcaccgtttagggatt
caagcctttgaaccgattttagtggaaggacgagcgattcaattgcatcccctagtttgt
ccagcatttaacgccgactttgatggcgaccagatggcggttcatgttcccctctcccta
gaatcgcaatcagaagcgcgactattgatgttagcgagccataacatcttgtctcccgca
acgggaacgcccattgttgcgccgtctcaagatatggttttaggaacgtattatctaacg
gcggaaaatgccacggtagagcctcaagataaacgatatttctctaatttagaggatgta
atttgtgcctaccagcaaggacacttaaatcttcatgcttatatttgggtgcgctttgaa
ggagaagtgagagaccctgtagaagcagaaccggtcgaagaagaaactcgtgaggatggc
actgtgctgaaagtgtatcccaatcgacgggtgaaagaaaatgcagacggagaagtagta
gcgcaatatattcgcaccaccgccgggcgtgtgatctataacaaaacaatccacgatgct
ttattaggtagttctgtagttaacgtttaa
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