Dactylococcopsis salina: Dacsa_0937
Help
Entry
Dacsa_0937 CDS
T02378
Name
(GenBank) RNA polymerase sigma factor, cyanobacterial RpoD-like family
KO
K03086
RNA polymerase primary sigma factor
Organism
dsl
Dactylococcopsis salina
Brite
KEGG Orthology (KO) [BR:
dsl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dacsa_0937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsl03021
]
Dacsa_0937
Transcription machinery [BR:
dsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dacsa_0937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
AFZ49666
UniProt:
K9YRT3
LinkDB
All DBs
Position
complement(935096..936262)
Genome browser
AA seq
388 aa
AA seq
DB search
MVNALTNQQQKSELERLIEEQSHEAAQGNTVALEVEPADSDLEKEALLEAEPPEEAPQKI
EATTTKEDSKKKSYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLSELERTRTELEAT
IGCEPTDEEWAEEVGQALPKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDL
IQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIK
KTTKILSQELARKPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIE
ADGETPEDEVSKSLLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGQIFNVTRE
RIRQIEAKALRKLRHPNRNSILKEYIRT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacgcactaaccaaccagcagcaaaaaagcgaactcgaacgcttaattgaggag
caaagtcacgaagcagcgcaaggaaacacagtagcgctagaagtggagccggcggattcg
gatttagaaaaagaagcccttttagaagctgaacctccagaagaagcgccacaaaaaata
gaagcaacaactacaaaagaagacagcaaaaagaaatcttatacagaagattcaattcgg
ctttatctacaggaaatcggtcggattcgcttattgcgggctgatgaggaaattgagtta
gcgcggaaaattgccgatttatcggagttagagcgcacacgcacggaattagaagctacc
atcggttgtgaacccacagatgaggaatgggccgaagaagtgggacaagcactcccgaag
ttccgtcgtcgcttgctgttgggacgcagggcgaaagagaaaatggtgcagtctaactta
cggctagtggtttcgatcgcgaaaaagtatatgaatcgggggttatcttttcaagatttg
attcaagaggggtctttaggtttaattcgcgctgcggaaaagtttgatcacgaaaaaggg
tataagttttctacttatgcaacgtggtggattcggcaagcgatcactcgcgcaatcgcg
gatcaatcacgaacaattcgtcttcccgttcacttatatgaaaccatttctcgcattaag
aaaaccactaagattctctctcaggaattagcgcgaaaacccactgaggaagagatcgcc
gaacgcatggaaatgacgatcgagaaattacggtttattgctaaatcagcacaattaccg
atttctttagaaacgcccattggcaaggaagaagattctcgtttaggggattttattgaa
gcggacggagaaaccccagaagatgaagtttcaaaaagtttactccgagaagatttagag
gatgttctcgacacactgagtcctcgtgaacgagatgttctaagactgcgctacggctta
gaagatggacggatgaaaactttagaagaaattggacagatttttaacgtcacccgtgaa
cggattcgacaaatcgaggcgaaagcattaagaaagttgcgccatcccaaccgcaacagc
attttaaaggagtatattcgcacttaa
DBGET
integrated database retrieval system
